| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2308 |
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| Symbol | |
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| ID | 4078298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2426867 |
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| End bp | 2427511 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007630 |
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| Product | cell wall hydrolase, SleB |
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| Protein accession | YP_614302 |
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| Protein GI | 99082148 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.809366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGA AACTGATGTG GGCCGCAGTG GTTGCGGCAA CACTAGGCGG GAGCATGGCC
TCTGCGGATA TGGGGCTGGA TGCGCTTTTC AAACAGGAGC AGTCGACGCT TCAAGCCGCA
CCCAAAGAGC GCATGCTGCG TTTCTTGGGC GGAAAACGCC AGACCCGCAC CAATGGCGTG
ACGCAGGTGG AATTCACCCG CGACTTCCTC GACAGCCGCC CCGCCGCAAC GGGCGGTAGC
GAGTTTGAAT GTCTCGCAGA GGCGCTCTAC TTCGAGGCGC GCGGCGAGAC CGTCAAAGGC
CAGTTCGCAG TGGCCGAAGT GATCAAGAAC CGGGTGCAAA GCGCCCAGTT CCCGAATACG
TTTTGCGGTG TCATCAACCA GGGCACGGGC CGCAAATACC AGTGCCAGTT CACCTATACC
TGTGATGGCC ACAAAGAAGT GATTCACGAA CCCCGCGCCT TTGAGCGCGT GGCCAAAGTG
GCGCGGCTGG TGCTGGATGG GGTGAACCCA AAGCTCACCC AAGGGGCCAC CTATTACCAC
ACCACCGCCG TTAGCCCACG CTGGTCGCGC AAGTTTACCA AGACCGCGCG AATTGGCGTG
CACCTGTTCT ACCGGGACGA GCGCTACCGC ACGGCCTCGA ACTAA
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| Protein sequence | MKRKLMWAAV VAATLGGSMA SADMGLDALF KQEQSTLQAA PKERMLRFLG GKRQTRTNGV
TQVEFTRDFL DSRPAATGGS EFECLAEALY FEARGETVKG QFAVAEVIKN RVQSAQFPNT
FCGVINQGTG RKYQCQFTYT CDGHKEVIHE PRAFERVAKV ARLVLDGVNP KLTQGATYYH
TTAVSPRWSR KFTKTARIGV HLFYRDERYR TASN
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