| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2278 |
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| Symbol | nadE |
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| ID | 4078462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2394154 |
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| End bp | 2395815 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007600 |
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| Product | NAD synthetase |
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| Protein accession | YP_614272 |
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| Protein GI | 99082118 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
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| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.601825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCCG ATAGTTTTCG CATCACCCTT GCGCAATTGA ATCCGACGGT TGGGGATTTG
GCGGGCAATG CCGCCAAGGC TCTCTCGGCC TGGCAGGAGG GTCGCGCGGC GGATGCGGAT
CTCGTGGCGC TGCCGGAGAT GTTCATCACC GGCTACAACA CGCAGGATCT GGTGATGAAA
CCGGCCTTTC ATCAGGCTGC GATCGCTGAG GTCGAGGCGC TTGCGAAGGC CACTGCAGAG
GGTCCTGCCT TGGCCATCGG CAGCCCCTGG GTCGAGGACG GCAAGCTCTA CAATGCCTAT
CTGATCCTCA AGGGCGGCAA GATCGCCTCC AAATGCCTCA AGCACCATCT TCCCAATGAG
ACGGTGTTTG ACGAGGTTCG GATCTTTGAC GCAGGCCCGC TGGGCGGGCC GTATTCCGTG
GGCAACACCC GCATCGGCAG CCCGATCTGC GAGGATGGCT GGCACGAGGA TGTCGCCGAG
ACGCTGGAAG AAACCGGCGC TGAGTTCCTG CTCATTCCCA ATGGCTCGCC CTATTACCGC
GGCAAGATGG AAACCCGCAT CAACCACATG GTTGCTCGGG CGGTCGAAAC GGGCCTGCCG
GTGATCTACC TCAACATGGT GGGCGGTCAG GACGATCAGG TCTTTGATGG GGGCAGCTTT
GCGCTCAACC CGCATGGGGC TTTGGCGGTG CAGATGCCGG TCTTTGACGA ATGCATCGCA
CAGCTTGATC TCGAGCGCAC CGCCGATGGC TGGCGCATCA AAGAGGGCGA AAAGGCGCAT
CTACCCGATG CGTGGGAGCA GGACTATCGC ACCATGGTGC TGTCCTTGCG CGATTACATG
GGCAAGACCG GCTTCAAAAA AGCGCTGCTG GGCCTCTCGG GGGGGGTGGA TTCCGCCATC
GTTGCGGCCA TCGCCGTCGA TGCCTTGGGC GCGGAAAACG TGCGCTGCGT CATGCTGCCG
TCGGAATATA CCTCCAAGGA ATCACTCGAG GATGCAGAGG CCGTCGCCAA GGCGCTGGGC
GTCCACTACG ACTATGTGCC GATCTCTGAG GGCCGCGAAG CAATCACCAA CACGCTTGCG
CCGCTCTTTG CGGGACGGGA CGCGGATCTC ACCGAGGAAA ACATCCAGTC CCGCCTGCGC
GGGCTTCTGC TAATGGCCAT GTCGAACAAA TTTGGCGAGA TGCTCCTGAC CACCGGCAAT
AAATCCGAGG TCGCGGTGGG CTATGCCACC ATCTACGGCG ATATGAACGG CGGTTATAAC
CCGATCAAGG ATCTCTACAA GACGCGTGTG TTTGAAACCT GCCGCTGGCG CAATGCCAAT
CACCGCGACT GGATGATGGG GCCAGAGGGC GAGGTGATCC GCCCCAATGT GATCGACAAG
CCCCCCTCAG CCGAGCTGCG CGAGGACCAG AAGGACAGCG ATTCCCTGCC GGACTATCCC
GAGCTCGATG CGATTCTCGA CATTCTCGTG GATCAGGAAG GATCAATCGC CGATTGCGTC
GCCGCAGGCT TTGACCGCGA CGTGGCAAAA CGGGTCGAAC ACCTGCTTTA TATCAGCGAA
TACAAGCGCT TTCAGTCCGC TCCCGGCGCG CGGCTGACCA AGCGGGCCTT CTGGCTTGAT
CGGCGTTATC CGATTGTCAA TCGCTGGCGT GATCCCAGCT GA
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| Protein sequence | MMADSFRITL AQLNPTVGDL AGNAAKALSA WQEGRAADAD LVALPEMFIT GYNTQDLVMK
PAFHQAAIAE VEALAKATAE GPALAIGSPW VEDGKLYNAY LILKGGKIAS KCLKHHLPNE
TVFDEVRIFD AGPLGGPYSV GNTRIGSPIC EDGWHEDVAE TLEETGAEFL LIPNGSPYYR
GKMETRINHM VARAVETGLP VIYLNMVGGQ DDQVFDGGSF ALNPHGALAV QMPVFDECIA
QLDLERTADG WRIKEGEKAH LPDAWEQDYR TMVLSLRDYM GKTGFKKALL GLSGGVDSAI
VAAIAVDALG AENVRCVMLP SEYTSKESLE DAEAVAKALG VHYDYVPISE GREAITNTLA
PLFAGRDADL TEENIQSRLR GLLLMAMSNK FGEMLLTTGN KSEVAVGYAT IYGDMNGGYN
PIKDLYKTRV FETCRWRNAN HRDWMMGPEG EVIRPNVIDK PPSAELREDQ KDSDSLPDYP
ELDAILDILV DQEGSIADCV AAGFDRDVAK RVEHLLYISE YKRFQSAPGA RLTKRAFWLD
RRYPIVNRWR DPS
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