| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2237 |
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| Symbol | |
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| ID | 4077304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2350145 |
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| End bp | 2351275 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007559 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_614231 |
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| Protein GI | 99082077 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.246635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC TAATGTTGGC CACAGCGGCC GCGGCGCTGG CCGCGGGCGG AGCGATGGCA
GAGGTCAAAG TCGGGATGAT CACCACGCTT TCGGGCGGCG GTGCGAGCCT CGGCATCGAC
ACGCGGGACG GGTTCATGCT GGCGATGGAA GCCGCAGGTC GCGATGATGT CGAAGTGGTC
ATCGAGGACG ACCAGCGCAA GCCCGACATC GCCGTGCAGC TTGCCGATAA GATGATCCAG
TCCGAAAAGG TCGACGTGAT GACCGGTATC GTCTGGTCCA ACCTTGCAAT GGCCGTGGTG
CCTGCGACTA CCGCGCAGGG GCTGTTCTAT CTTTCGACCA ACGCGGCCCC CGCACAGCTG
GCGGGCAAAG GCTGCAACGC CAATTATTTC TCGGTCGCCT ACCAGAACGA CAACCTGCAT
GAAGGCGCGG GCGCCTATGC AACGCAGGCG GGGTTCAAGA ACACCTTCAT TCTCGCACCG
AACTACCCGG CGGGGATCGA CAGCCTCACT GGCTTCAAAC GTTTCTATGA AGGCGATCTC
GCAGGGGAGG TCTACACCAA GCTCGGCCAG ACTGATTACG CGGCTGAAAT CGCGCAGATC
CGCGCATCCG GCGCCGACAG CGTGTTCTTC TTCCTGCCCG GCGGCATGGG GATTTCCTTC
CTGAAGCAAT ATTCTGACAG CGGCGTCGAC CTGCCCGTCG TCGGCCCGGC CTTCAGCTTT
GATCAGGGCA TCCTGCAAGC GGTGGGCGAA GCGGCGCTTG GCGTCAAGAA CTCCTCCACC
TGGTCCAAGG ATCTGGACAA TGAGGCCAAC GCGGCCTTTG TTGCGGCCTT CCAGCAGAAA
TACGACCGTC TGCCGTCGAT CTATGCGGCG CAGGGCTATG ACACCGCAAA CCTGCTGCTG
TCGGCCATCG ACAAGGCGGA TGTGAATGAT GACGCAGCCT TTGCTGCGGC CCTCAAGGAG
GCCGATTTTG CCTCTGTGCG CGGCGAATTC TCCTTTGCGG CCAACAACCA CCCGATCCAG
AACGTCTATG TGCGTGAGGT CATCAAGGAA GGCGACGTCT ACACCAACAA GATCGTCGGC
ACCGCTCTTG AGGATCATGC AAACGCCTAT GTGGACGAGT GCAAGATGTA A
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| Protein sequence | MKKLMLATAA AALAAGGAMA EVKVGMITTL SGGGASLGID TRDGFMLAME AAGRDDVEVV
IEDDQRKPDI AVQLADKMIQ SEKVDVMTGI VWSNLAMAVV PATTAQGLFY LSTNAAPAQL
AGKGCNANYF SVAYQNDNLH EGAGAYATQA GFKNTFILAP NYPAGIDSLT GFKRFYEGDL
AGEVYTKLGQ TDYAAEIAQI RASGADSVFF FLPGGMGISF LKQYSDSGVD LPVVGPAFSF
DQGILQAVGE AALGVKNSST WSKDLDNEAN AAFVAAFQQK YDRLPSIYAA QGYDTANLLL
SAIDKADVND DAAFAAALKE ADFASVRGEF SFAANNHPIQ NVYVREVIKE GDVYTNKIVG
TALEDHANAY VDECKM
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