| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2224 |
|---|
| Symbol | |
|---|
| ID | 4078215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 2335093 |
|---|
| End bp | 2335857 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638007546 |
|---|
| Product | precorrin 6A synthase |
|---|
| Protein accession | YP_614218 |
|---|
| Protein GI | 99082064 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2243] Precorrin-2 methylase |
|---|
| TIGRFAM ID | [TIGR02434] precorrin-6A synthase (deacetylating) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCAGC TCAGTCTGAT CGGGATCGGC ACCGGCAACC CCAAGCACCT GACCCGCGAG
GCGATGGAGG CAATCTGCGC GCAGGATTTG ATCCTGATAC CCAACAAGGG CGCAGGCAAG
GACGACCTTG CCGGGCTGCG GCAAGCGATC TGCGCCGATG TCCTGGCGGG CGCGGCATCG
GCGCCCAAGA TCGTCGAATT CGACCTTCCC GTGCGTGATC CGGCCACTCC GGATTACCGC
CAGCGGGTCG AGGACTGGCA CGACGCCATC GCAGAGGTTT GGCAGGCCAC ACTCGCTGCA
CATCTCCCCA AAGGCGGGCA AGCCGGGTTT CTGGTTTGGG GCGACCCCTC ACTCTATGAC
AGCACCATGC GCATTGCCGA GCGTCTTGGT CAGCGCATGG AAATGCAGAT GCGGGTGATC
CCCGGCATCA CCTCGGTGCA AGCGCTGACG GCGGCGCATG GGGTGCCCCT CAACCGGATC
GGCGCGCCCG TGCAGATCAC CACCGGACGC CAGCTCCGCG ATGCGGGCTG GCCCGCGGGC
TGTGACACGT TGGTCATCAT GCTGGATGGG GAGTGCTCGT TCCAGAGCGT CGACCGTCCC
GAACAGGTCA TGATCCACTG GTCCGCCTAT GCGGGGATGG AAAACGAGAT CAATATCGCC
GGGCGTCTCT CCGACGTGCA GGACCAGATC CTGTCAGTGC GCGCCCGCGC ACGGCGCGAT
CATGGCTGGA TCATGGACAT CTACATGCTG GAACGCCTGC GCTGA
|
|---|
| Protein sequence | MLQLSLIGIG TGNPKHLTRE AMEAICAQDL ILIPNKGAGK DDLAGLRQAI CADVLAGAAS
APKIVEFDLP VRDPATPDYR QRVEDWHDAI AEVWQATLAA HLPKGGQAGF LVWGDPSLYD
STMRIAERLG QRMEMQMRVI PGITSVQALT AAHGVPLNRI GAPVQITTGR QLRDAGWPAG
CDTLVIMLDG ECSFQSVDRP EQVMIHWSAY AGMENEINIA GRLSDVQDQI LSVRARARRD
HGWIMDIYML ERLR
|
|---|
| |