Gene TM1040_2182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2182 
Symbol 
ID4076781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2292577 
End bp2293533 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content59% 
IMG OID638007504 
Productfatty acid desaturase 
Protein accessionYP_614176 
Protein GI99082022 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0979367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGGAGG TCCCGCCCGC GATCGACGTC GCCGAAGCAG AGGCCAGAGC GGTCCTGCCC 
AAACATCCGG AATGGGGAAC TTTCCTCCTG ATTGTGGCTT GCTATCTCCT TTGGGCAGGC
GCTCTCTTTG GTCTGGCGCA GGTATCGCAG GCTCTGGCCG TCGTGGCGGC GGGGCTAATG
GTGGCGTTGC ATTCCTCGCT CTGCCATGAG GTGTTGCACG GGCACCCCTT TGCGAGGCGC
GCGCTTAACG AGGCGCTGGT GTTTTTGCCG CTCAATCTTT GTGTGCCCTA TGGCCGGTTT
CGCGACACGC ATCTTGCGCA CCACCAGGAT GAAAACCTCA CCGATCCCTA TGATGATCCC
GAGAGCAATT TCATGGATCC GGAGATCTGG GCGCGCCTGC CAAAATGGCG ACAGAGCCTC
TTGCGTGTGA ACAATACGCT TCTGGGGCGC ATACTCTTGG GGCCAATGAT CGGGCAGATC
TGCTTTATGC AGACGGACTG GCGGTTGGCA CGCAATGGTG TGTGCGGGAT CGGACGCGAT
TGGCTGCTGC ACGGGATCGG AATCCTGTTG GTCTTGGGGA TCGTGAGCCT CTCGGAGATG
TCGGTTCTTG CCTATCTGGG CGCTGCCTAC ATCGGACTGG CATTGCTCAA GATCCGTACC
TATCTGGAAC ACCGTGCCCA TGAGGACATG CACGGCCGCA CGGCAATCGT GGAGGGACGG
GGAGTGCTCG GCTGGATCCT GAGTTTTCTG TTCCTGAACA ACAATCTCCA TATTGTGCAT
CATCTCTATC CCGGCGTACC GTGGCACCGG TTGCCCCGGC TTTATCGTCA GCACCGCGCG
CGCTTTCAGG ACCGGAATGA CGGCTATGTG CTGCCCAGCT ATGCGAGCGT GTTTCGCCAG
TTTGCCTTTC GCGCCAAAGA CCCGGTGCCA CATCCGCTCT GGAAATCCTC CGAGTAA
 
Protein sequence
MLEVPPAIDV AEAEARAVLP KHPEWGTFLL IVACYLLWAG ALFGLAQVSQ ALAVVAAGLM 
VALHSSLCHE VLHGHPFARR ALNEALVFLP LNLCVPYGRF RDTHLAHHQD ENLTDPYDDP
ESNFMDPEIW ARLPKWRQSL LRVNNTLLGR ILLGPMIGQI CFMQTDWRLA RNGVCGIGRD
WLLHGIGILL VLGIVSLSEM SVLAYLGAAY IGLALLKIRT YLEHRAHEDM HGRTAIVEGR
GVLGWILSFL FLNNNLHIVH HLYPGVPWHR LPRLYRQHRA RFQDRNDGYV LPSYASVFRQ
FAFRAKDPVP HPLWKSSE