Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2180 |
Symbol | |
ID | 4076779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2290874 |
End bp | 2291602 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638007502 |
Product | NUDIX hydrolase |
Protein accession | YP_614174 |
Protein GI | 99082020 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0550608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCGA CCGGTGCAAG CGACACAAGC ATAGACAAGA CCACGATTCG CGATGCCGCG ACGGTGATCG TGGTGCGCGA TAGCAAAAGC GACGACCCCA AGGTCCTGAT GGGCCAGCGT GGCGCCAAGG CCGCGTTTAT GCCCAACAAA TTTGTGTTCC CCGGTGGCGC AATGGATCTG GGCGATCGCG AGATTGCCCT GGCCGGTGAC ATTGGTGCGC CCTGCCGGAA CCGCCTGCAA GAAGATGGGG GCGCAGAGGT CTGGCGCGCG CTCTGCGTGG CCGCAGCCCG TGAACTCTGG GAGGAAACAG GGCTGATCCT TGGACAGCCG GGGTATTGGC CCGCCGAGGT GCCCAAGGAT TGGCAGAGCT TTGCCGCAAC GGGCCATGTT CCGGATGCTT CGGCGCTGAC ATTCGTGTTT CGCGCCCTGA CCCCGCCGGG TCGCCCGCGC CGCTTTGATG CACGGTTCTT CTTGCTCAAA GCGGAGGATC TGCGCGGCGA TCTAGATGAC TTCTCCCGCG CCTCCGACGA GTTATCCCAC CTGCAGTGGA TCCCGCTCAG CCAGGTGCGC AGCTTTGATC TGCCGTTCAT CACCGAGGTC GTGCTGGCAG AGGTCACCGC CAACCTGCGC CACGAAAGCC CCCCGGAGAG CACGCCCTTT TTTCGCAATG ATGATGAAGA GAGCCTCTTT TTGCGCTTGC ATGGCCGCCC GATGTCGCAG GCGGATTGA
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Protein sequence | MAATGASDTS IDKTTIRDAA TVIVVRDSKS DDPKVLMGQR GAKAAFMPNK FVFPGGAMDL GDREIALAGD IGAPCRNRLQ EDGGAEVWRA LCVAAARELW EETGLILGQP GYWPAEVPKD WQSFAATGHV PDASALTFVF RALTPPGRPR RFDARFFLLK AEDLRGDLDD FSRASDELSH LQWIPLSQVR SFDLPFITEV VLAEVTANLR HESPPESTPF FRNDDEESLF LRLHGRPMSQ AD
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