| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2164 |
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| Symbol | |
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| ID | 4076763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2273080 |
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| End bp | 2274366 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007484 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_614158 |
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| Protein GI | 99082004 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0414769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAC CGCTTCGACT GGGGATTGCA GGTTTGGGCA CGGTCGGCAT TGGCGTGGTG
AAGATCATTC GCCGCCATGC TGCCCTGTTG GAGGCGCGAA CTGGCCGCCC GGTGGTGATC
ACTGCCGTTT CGGCCCGCGA CGCCACCAAG GATCGCGGCG TGTCGCTCAA GGACTATGCG
TGGGAAACCG ATCCAGTCGC CCTTGCCACG CGCGATGATG TCGATGTGTT TGTCGAACTG
ATGGGCGGGC ACGAAGGCCC GGCCCGGCTT GCAACGGAGG CTGCGCTGGC AGCCGGCAAG
GATGTGGTCA CCGCAAACAA GGCGCTCCTG GCGATCCACG GCCAGGATCT GGCCGAACGC
GCAGAGGCCA ATGGCAGCGT CATCCGCTTT GAGGCGGCGG TTGCAGGTGG CATCCCCGTG
ATCAAATCCA TGACCGAGAG CCTTGCAGGC AATGAAATCA CCCGCGTCAT GGGCGTGATG
AACGGCACCT GCAACTATAT CCTCACGCAG ATGGAAGCCA CAGGCCGGGG TTATAACGCT
CTCTTTGAGG AATGCGGCAA GCTTGGCTAC CTGGAGGCCG ACCCGCTGCT GGACGTGGGC
GGTATTGATG CCGGCCACAA GCTGGCGCTC CTGGCCTCTA TCGCGTTTGG GACCAAACCG
GCCTTTGACG ATGTCAAACT CGAAGGCATT CAGCGCATCG CCATTGAAGA CATCCGCCAC
GCCGCCGATA TGGGCTATCG GATCAAGCTT CTGGGCGTTG CACAGCGTTC GGCGCGCGGG
CTTGAGCAGC GCATGACCCC CTGCCTGGTG CCCGCGAATT CTCCGCTCGG GCAGCTTGAG
GGCGGCACCA ACATGGTGGT GATCGAGGGC GACGCCATCG AACAAGTGGT GCTGCGCGGC
CCCGGCGCGG GCGAAGGCCC CACCGCCAGT GCGGTGATGG GCGATGTGCT CGACATTGCG
CGCGGCCTGC GGATCTCGAC CTTTGGCCAG CCGGCCACGA CGCTCTCGAA AGAACCAGCC
GCACAAACCG GCCTGCCTGC GCCCTATTAT GTGCGTATGG CGCTGCAGGA CAAACCCGGC
GCGCTGGCCA AAGTCGCCGC AGCATTGGGG GATGCGGGGG TCTCTATCCA CCGGATGCGC
CAGTATGATC ACGCCACCAC AGTGGCTCCG GTGTTGATCG TGACTCACAA ATGCACGTCT
GCCATGCTGG AACAGGCCCT TGAGGCGCTG GCCGCAACAG GCGTGGTTGA AGGCGCCCCC
GTGGCGCTGC GCATCGAAGA GCTGTGA
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| Protein sequence | MTEPLRLGIA GLGTVGIGVV KIIRRHAALL EARTGRPVVI TAVSARDATK DRGVSLKDYA
WETDPVALAT RDDVDVFVEL MGGHEGPARL ATEAALAAGK DVVTANKALL AIHGQDLAER
AEANGSVIRF EAAVAGGIPV IKSMTESLAG NEITRVMGVM NGTCNYILTQ MEATGRGYNA
LFEECGKLGY LEADPLLDVG GIDAGHKLAL LASIAFGTKP AFDDVKLEGI QRIAIEDIRH
AADMGYRIKL LGVAQRSARG LEQRMTPCLV PANSPLGQLE GGTNMVVIEG DAIEQVVLRG
PGAGEGPTAS AVMGDVLDIA RGLRISTFGQ PATTLSKEPA AQTGLPAPYY VRMALQDKPG
ALAKVAAALG DAGVSIHRMR QYDHATTVAP VLIVTHKCTS AMLEQALEAL AATGVVEGAP
VALRIEEL
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