Gene TM1040_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2161 
Symbol 
ID4076760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2271476 
End bp2271964 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content62% 
IMG OID638007481 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_614155 
Protein GI99082001 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.114722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGA AGGATCTGAA ATCCGGGCGG TTGCATGCAA CGGAGCCTGT GCAGATGACG 
GCGGCGGATC GCGAGGCCTT GTTCGCACCG GAGGTTGTGG CGTTCCTTCC ACCGGGGTTT
CAAAACCTGG GGTCCGATGC AGCGCGGCGT CACCTCATTG ACGCGCTGCA ACAAGAGGCC
GAGGTCGTCG CGCTGAGCGC TCAAGATCAA GAGATTGTCG GTCTCGTAAT CCTGTCTTTT
GCCCATGACG CCGCGGGCCA GCGCAATCTG GGCTATCTCT TTACGCGCCG GGCATGGGGG
CAGGGCTATG CCAGCGAGAT GCTGCGCGCG CTGCAAGATC AGCTGCGAGG AACGCACGTG
GTGTTGTCCG GTGGCGTGAT GGCCGAGAAC GCCGCCTCGG CCCGTGTCCT CGAGAAATGC
GGATTTGAAC CCGGCGAGAA AACTGCCTCT GGTGAGATGA CCTATGTTTG GGATGCCGCA
CAGGGCTAA
 
Protein sequence
MELKDLKSGR LHATEPVQMT AADREALFAP EVVAFLPPGF QNLGSDAARR HLIDALQQEA 
EVVALSAQDQ EIVGLVILSF AHDAAGQRNL GYLFTRRAWG QGYASEMLRA LQDQLRGTHV
VLSGGVMAEN AASARVLEKC GFEPGEKTAS GEMTYVWDAA QG