Gene TM1040_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2154 
Symbol 
ID4076753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2261944 
End bp2262378 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content66% 
IMG OID638007474 
Producthypothetical protein 
Protein accessionYP_614148 
Protein GI99081994 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.726006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.128736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA ATTTGCCAAC GATTGCACAG GCCAAAGCCA TGGCTAGAGA GTGGCGCGCA 
GCCCGCCAGC AGGCGGGCGA GAGCCTGCGC CACGGCGCGG CGCTTGAACA TGTGGCCCGG
CAGCTGGGGT TTCGCGATTG GAACCTATGC GCTGCGATGC TGTCGCAGGC CGAGGCGCAG
CGTTACCAGC CCGGGCAGGT GGTCCGGGGG CGCTACCTGT CGCAACCCTT TTCCGCGCGC
GTGCTGCGGG CGACCGCGGT AGAGGGGCGC GTGGGCTGGG TCAGGCTGGA GCTGGATCTG
GAGGTGCCGG TTGACGTGGT CACATCACAG CGGTTCTCCA GTTTCAGACG CCGGGTCAAC
GGCGTGATTG GCCCTGAAGG CTTCAGTCGC GAGCAGACCT CTGACGGGCA ACCGCATCTG
GTGATCGATC CTTAA
 
Protein sequence
MTENLPTIAQ AKAMAREWRA ARQQAGESLR HGAALEHVAR QLGFRDWNLC AAMLSQAEAQ 
RYQPGQVVRG RYLSQPFSAR VLRATAVEGR VGWVRLELDL EVPVDVVTSQ RFSSFRRRVN
GVIGPEGFSR EQTSDGQPHL VIDP