| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2134 |
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| Symbol | |
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| ID | 4076448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2239477 |
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| End bp | 2241516 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007454 |
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| Product | capsule polysaccharide biosynthesis |
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| Protein accession | YP_614128 |
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| Protein GI | 99081974 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3563] Capsule polysaccharide export protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAAG GGCCTTTGCC GCATCTGGAC GAGACCAGAA CCGGGAGCAA ACGCTCCCGG
TTGTTTGTGT ATAACGGAGG GTTTCTGACC CAGTCCCGTG TCCGGCGCAT TCTTGATCTA
GCGGGCTATG ACATTCGTCT GGGCCTGCCC AAAGAGGGCG ATCTGGTCGG GATCTGGGGC
AACAGCCCCA CCGCCCATCG CGGCCGCAAG ATTGCCCAAG AGCATAACGC GCCCTTGGTG
CGCATTGAGG ATGCGTTCCT GCGCTCGGTG CATCCGGGCC GCGATGGCGA GCCCCCGATG
GGATTGCTGA TTGACCGCGC TGGCGTGCAT TTTGACCCGG CCCTTCCAAG CGACCTCATC
ACGCTCCTGA AAGAACACCC ACTCGATGAC AGCGCCTTGA TGAAGCGCGC GCGCGACGCC
ATGGCAAGGC TTCAGGACGC GCATCTGAGC AAATACAACG CCTTCCATCC CGATGTTCCC
CCACCAGAAC CCGGCTACGT GCTGGTGGTG GATCAATTGC GCGACGATGC GTCCGTCAAG
GCCTCGATCC CCTTCCCCGG CGCGGACCGG GGACGCTTTC AGGAAATGCT GGCCTTTGCG
CGCGAAGAAA ACCCCGGCGC GCGCGTATTG ATCAAGACCC ATCCGGAAAC CACCAAGGGC
CACCGTGCCG GCTATTTCGA CGCGCGTGAC ACCAATGATC AGGTGGAACT CTTTGATGCG
CCAGTCTCGC CACATCTGCT GCTCGAGGGC GCTGTGGGCG TCTATACCGT GTCGTCGCAA
CTCGGGTTCG AGGCCATCCT TTCCGGGCAC AGGCCGCGTA TCTTTGGCCA GCCTTTCTAT
GCCGGATGGG GCCTGACGCA GGATGAGTTC CCCCCCGCGG GGCGTCATCG TCGCCTGACC
CGCGCACAGC TTTTTGCGGC GGCCATGATC CTCTTTCCCA CCTGGTATGA TCCCCATCAC
GACCGGCTTT GCGAGCTGGA GGACGTGATC GACTCTCTGG AGGCGCAGGT CCGGGCCTGG
CGCGAAGACC GCGCTGGCTG GGCTGCCTCA GAGATGCGTC TGTGGAAGCG CGCGCCCTTG
CAGCAGTTCT TCGGGCGCCA CAAGCGCATG AGTTTCACCG AAAAAACCGC AACTGCCAAA
AAGAGCGGCA AGAACTGGAT GGTCTGGGCC AGCAAGGCGA CCAAGGATCA CGCCGGGGCG
CATCATCTGG AAGATGGATT CTTGCGCTCG CGGGGGCTCG GGGCTGAACT GGTGCCGCCC
TTGTCATTGG TGCTGGATCG TCAGGGCATT TATTATGACC CGACCCGTCA CAGTGATCTG
GATGACCTGA TCCGCGAACG CGTCACGCTG AGCCCGCAGC AGGAACGCCG GATCGAGGCG
CTGGTGATGC GGCTCATCAA ACATGAGGTG ACAAAATACA ATCTCGATGG CGCACTGCCC
GATTTGCCCA AAGGGCATCG GGTTCTGGTG CCCGGCCAGG TCGAGGATGA TGCCTCCCTG
CGGCTCGGAG CGGGTAAGAT CAACACCAAT ATGAAGCTGT TGCAGGCCGT GCGGGCTGCG
CGCCCGAATG CGGTCGTGAT TTACAAACCG CACCCGGATG TGGAGGCAGG CCTGCGCAAG
GGCCGCATCA GCCACGCCGA GGCCTGGGCG GATGTGGTGG CAGAGCATGC CAACCCGGCG
GCGCTGATCG ACAGTGTCGA TGAGGTCTGG ACCATGACGT CGCTCCTGGG GTTTGAGGCT
TTGTTGCGGC GGGTGCCGGT CACCTGTGTG GGGCTGCCGT TTTATGCTGG ATGGGGGCTG
ACGCGGGATC GGCTTCAGGC GCCCCATTGG CGCGATGCGC GCCCTGGTAT CCTTGGGCTC
GCCCATGCGG CGCTCATCGA CTATCCGCGC TATTTTGATC CGGTCTCAAA GCTGCCCTGC
GCGCCCGAGG TTGCTGTCGA TCGGCTGATT GCCGGAGAGC TGCCTGCGCG CAGCCCCCTG
AACAGCAGCC TCTCGAAATT GCAGGGGCTC TTTGCCTCAT TTGCTCCGCT CTGGCGCTGA
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| Protein sequence | MMQGPLPHLD ETRTGSKRSR LFVYNGGFLT QSRVRRILDL AGYDIRLGLP KEGDLVGIWG
NSPTAHRGRK IAQEHNAPLV RIEDAFLRSV HPGRDGEPPM GLLIDRAGVH FDPALPSDLI
TLLKEHPLDD SALMKRARDA MARLQDAHLS KYNAFHPDVP PPEPGYVLVV DQLRDDASVK
ASIPFPGADR GRFQEMLAFA REENPGARVL IKTHPETTKG HRAGYFDARD TNDQVELFDA
PVSPHLLLEG AVGVYTVSSQ LGFEAILSGH RPRIFGQPFY AGWGLTQDEF PPAGRHRRLT
RAQLFAAAMI LFPTWYDPHH DRLCELEDVI DSLEAQVRAW REDRAGWAAS EMRLWKRAPL
QQFFGRHKRM SFTEKTATAK KSGKNWMVWA SKATKDHAGA HHLEDGFLRS RGLGAELVPP
LSLVLDRQGI YYDPTRHSDL DDLIRERVTL SPQQERRIEA LVMRLIKHEV TKYNLDGALP
DLPKGHRVLV PGQVEDDASL RLGAGKINTN MKLLQAVRAA RPNAVVIYKP HPDVEAGLRK
GRISHAEAWA DVVAEHANPA ALIDSVDEVW TMTSLLGFEA LLRRVPVTCV GLPFYAGWGL
TRDRLQAPHW RDARPGILGL AHAALIDYPR YFDPVSKLPC APEVAVDRLI AGELPARSPL
NSSLSKLQGL FASFAPLWR
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