| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2133 |
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| Symbol | |
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| ID | 4076447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2238343 |
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| End bp | 2239470 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007453 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_614127 |
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| Protein GI | 99081973 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTAC GGTGGGCGCG CCCCGTGGCC TTGTTGGCTG CGGTTGCCCT CGCAGCATCA
TGCGGGCTGC CCAAGGTGGG CCCGAACAAA CGTGAGATCT TTGCAGGGTC GGTACAAAAA
CAGGGCGATG CCTTTGTGGT CTCGGTCAAC GACCGCGTTG CCCGGGCAAC AGCCGTGGTA
CCCGCACTTG GGTTTTCCGA CGCCTTCACC AAAGCATCGG TTCTTACCTC CGACATCATT
CGCCCCGGCG ATATCCTTGG CCTGACGATC TGGGAAAACG TCGACGACGG GCTGCTTGCC
AGCGCCGGCG CCAATGCCAC CCTTCTCGAA GAAGTGCAGG TTGATGGTGC GGGCTTCATC
TTTGTGCCCT ACGCAGGCCG CGTGCGCGCC TCGGGCAATA CGCCAGAGCA GTTGCGCGAA
GCCATCACCA AGAAGCTCGA AGACCAGACG CCCGACCCGC AGGTTCAGGT GCGCCGCCTT
GCCGGCGATG GCGCCACAGT CAGCCTCACC GGAGCGGTGG GCGCGCAGGG GGTCTATCCA
ATCGAACGTC CGACGCGCAC TCTGGCCACC ATGCTGGCGC AAGCTGGCGG CGTGGCGATC
GAACCCGAGA TTGCGCAGGT CTCTGTGACC CGCCAAGGGC AGACTGGCAC GATCTGGTTC
GAGGACCTCT ACGACCACCC CCAGATGGAC ATCGCGCTGC GCAATGGCGA CAAGATCCTT
GTGGAAGGCG ATACGCGCTC CTTTACCGCG CTGGGAGCGA CCGCGGCGCA GGCCCGTGTA
CCTTTCGAGA GCCAGAACCT CTCGGCGCTT GAAGCTCTTG CACAGGTCGG CGGCCTGATC
GCCACGGCAT CCGATCCCAC CGGTGTCTTT GTCTTCCGCA ATGAACCTGA AGCGATCTCA
AATCAGGTGC TTGGGCGTGA CGATCTGATC GGCGCGCAGC GCATGATCTA CGTGCTGAAC
CTCACTCAGC CCAACGGTCT CTTCATTGCC CGCGACTTCG TGATCCGCGA TGGCGACACC
ATCTATGTGA CCGAAGCACC CTATGCCCAA TGGACCAAGA CGCTGTCTCT TCTGACCAGC
CCGCTGTCCA CGGCTGCAAG TGTCGAGACC CTGTTCGGCG GCAGTTAA
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| Protein sequence | MTLRWARPVA LLAAVALAAS CGLPKVGPNK REIFAGSVQK QGDAFVVSVN DRVARATAVV
PALGFSDAFT KASVLTSDII RPGDILGLTI WENVDDGLLA SAGANATLLE EVQVDGAGFI
FVPYAGRVRA SGNTPEQLRE AITKKLEDQT PDPQVQVRRL AGDGATVSLT GAVGAQGVYP
IERPTRTLAT MLAQAGGVAI EPEIAQVSVT RQGQTGTIWF EDLYDHPQMD IALRNGDKIL
VEGDTRSFTA LGATAAQARV PFESQNLSAL EALAQVGGLI ATASDPTGVF VFRNEPEAIS
NQVLGRDDLI GAQRMIYVLN LTQPNGLFIA RDFVIRDGDT IYVTEAPYAQ WTKTLSLLTS
PLSTAASVET LFGGS
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