| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2131 |
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| Symbol | |
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| ID | 4076445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2236064 |
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| End bp | 2236669 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007451 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_614125 |
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| Protein GI | 99081971 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCACCG GGATCATTAC CGATGTGGGA ACCATCACCG AGCTGGAACA AGCTGGCGAT
CTGCGCGCGC GTATCCAGAC CGCATATGAC ACCAGCAGCA TCGACATGGG GGCCTCGATT
GCCTCGGACG GCGTATGCCT GACCGTGGTG GCTCTGGGGC CAGATTGGTA CGATGTGCAG
ATTTCGGCGG AAACCACGTC GAAAACCAAC ATCGATGCCC GCGGCACCCA CAAGGGCTGG
TTCGTTGGCA AGCGCGTCAA TCTCGAACGC GCACTCAAAG TCGGTGACGA GCTTGGCGGC
CATATCGTGT CGGGCCATGT GGATGGCGTG GCCGAGGTGG TGGCCATGCG CGATGAAGGC
GACAGCACCC GGGTCACCCT GCGCGCCCCC AAGGAGCTTG CGCGTTTCAT TGCCCCCAAA
GGCTCGGTTG CCCTCAATGG CACCTCGTTG ACGGTAAACG AGGTGGAGGG CTGTGACTTT
GGGATCAATT TCATCCCGCA CACCAAGGAG GTCACCACAT GGGGTGATGT GGCGGTGGGG
GATCTCATCA ACCTCGAAAT CGACACGCTG GCCCGCTATG TCGCGCGGCT GCAAGAGAGC
CTCTGA
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| Protein sequence | MFTGIITDVG TITELEQAGD LRARIQTAYD TSSIDMGASI ASDGVCLTVV ALGPDWYDVQ
ISAETTSKTN IDARGTHKGW FVGKRVNLER ALKVGDELGG HIVSGHVDGV AEVVAMRDEG
DSTRVTLRAP KELARFIAPK GSVALNGTSL TVNEVEGCDF GINFIPHTKE VTTWGDVAVG
DLINLEIDTL ARYVARLQES L
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