| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2116 |
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| Symbol | |
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| ID | 4076430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2222305 |
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| End bp | 2223102 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007435 |
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| Product | transglutaminase-like |
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| Protein accession | YP_614110 |
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| Protein GI | 99081956 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.239433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGA CCATTCATCA CACAACCCGC TATCGCTTTG ACGAACCGGT CTCCTTTGGC
CTGCAACAGC TTCGTAAAAC GCCAAAAACC AACACCAACC AACAGGTTGT GGAATGGCAA
ACCCGTATTA TCGGGGGCCA GAAGGAGGTT TCCTTTGACG ACCACCACCA CAATGTGACG
GAACTTATCA GCTTTGAGCC CGGCGTGACG GAGCTGGAGC TGGTCTCAGA GGGCGTGGTC
GAACTGACCG ACACTCACGG CGTGGTGGGG CGTCACCGAG GCCCTTCGCC CCTGTGGCTC
TATGCCCGGC CCACTGTGCT GACAGAGGCA CGCGCGGGGG TGCGAGAGCT GATCCGCGAT
CTCGACGACA GCAACCCTGT CGACATGCTG CACCAGCTGT CCGCCCGCAT TCGCGAGGCC
ATCACCTATC AGATCGGCGT CTCGGAGCTT GGCTGGAGCG CGGAAGACGC GATCCAGTCA
GCGCATGGCG TCTGTCAGGA TCATGCCCAT GTCTTTATCG CCTGCGCGCG CAAGCTTGGC
CTGCCGGCAC GCTATGTCTC GGGTTACCTC ATGCTCGACG ATCGCACCAC TCAGGATGCC
ATGCACGCCT GGGCGGAGGC TCATGTCGAG GGACTCGGAT GGGTCGGCTT TGACGTCTCC
AACGGCATCT CACCCGATGC GCGCTACGTG CGTGTTGCAA CAGGGCTGGA CTATTCTGAT
GCGGCCCCTG TATCTGGAAC GCGAATTGGA GGCGCGGGCG AAGCGCTCGA CGTTCAGATC
GAAGTGGCGC AACAGTGA
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| Protein sequence | MRLTIHHTTR YRFDEPVSFG LQQLRKTPKT NTNQQVVEWQ TRIIGGQKEV SFDDHHHNVT
ELISFEPGVT ELELVSEGVV ELTDTHGVVG RHRGPSPLWL YARPTVLTEA RAGVRELIRD
LDDSNPVDML HQLSARIREA ITYQIGVSEL GWSAEDAIQS AHGVCQDHAH VFIACARKLG
LPARYVSGYL MLDDRTTQDA MHAWAEAHVE GLGWVGFDVS NGISPDARYV RVATGLDYSD
AAPVSGTRIG GAGEALDVQI EVAQQ
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