| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2085 |
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| Symbol | atpC |
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| ID | 4077836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2188825 |
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| End bp | 2189238 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007404 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_614079 |
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| Protein GI | 99081925 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGATA CGATGCAATT CGATCTCGTG AGCCCGGAGC GGAGCCTTGC TTCGCTTCAG
GCCCGCGCGG TCCAGATCCC CGGTGCTGAG GGTGACATGA CGGCGATGCC TTTGCACGCG
CCGACACTGA CCACCCTGCG TCCGGGCATC CTGAAGGTGG ACGCACCGGA AGGCACAACG
GAGTATCTCG TCACTGGCGG GTTTGCCCAG ATCACTGCCG AGGGCCTGTC GGTCCTCGCG
GAGCGGGCGA TCCCCATGGA CGAGATGACC CGCGCCCATC TGGACGAGCT CATCGAGGAA
GCCCGCACCA TGTACAAGAC CGCGCAGGAG GACAACTCTG AGCATGGTCT GGTGGAAGAC
GCGGCCAAGA TGCTTGCAGA CATGGAAGCG CTCGGGACCC ACATGAGCCT CTGA
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| Protein sequence | MADTMQFDLV SPERSLASLQ ARAVQIPGAE GDMTAMPLHA PTLTTLRPGI LKVDAPEGTT
EYLVTGGFAQ ITAEGLSVLA ERAIPMDEMT RAHLDELIEE ARTMYKTAQE DNSEHGLVED
AAKMLADMEA LGTHMSL
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