| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2080 |
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| Symbol | |
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| ID | 4077831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2183985 |
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| End bp | 2186429 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638007399 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_614074 |
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| Protein GI | 99081920 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0351429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC CGATCACCGC CCGCCTCTCG ATTGAAGGAA TGACCTGCGC CGGATGCGTG
GGGCGCGTCG ACCGCACATT GGCGGCCCTG CCGGGACTGC GGGACGTCTC GGTGAACCTC
GCCAATGAAA CCGCGCAAAT CACTGCCGAG AGCCCCGAGG CCCTGCAACA GGCCGACAGC
GCCCTGCGCG ATCTTGGCAA GCCTGCGCGC CATCAGAGCG TGCAGCTCTC GATCGAGGGC
ATGACCTGTG GCGGTTGCGT CGGTCGGGTG GAGCGCGCGA TCAAGGCGCT GCCGGGAGTG
GTTTCGGCCA ATGTGAACCT TGCCGCCGAG AGCGCGCAGG TGGAGATCCT GCAAGGTGTG
GTGACGCCCT CTGAGGTGGC CGCGGCCAGC ACGCAGGCGG GCTATCGTGC GCGCCCCGCA
GAGGCAACAG ACACCGAGGA CCGCGCCGCC CGCAAGGATC GTGAAGCGCG CGACCTGCGC
CGTCAGGTCA TGATCGCCGC CGCGCTGACG CTGCCTGTAT TTTTGCTCGA GATGGGCGGT
CATGTGGTGC CAGCCGTGCA TCACTGGATT GCGCAGACCA TCGGCATGCA AACCTCTTGG
GTGATGCAGG CCCTGCTGAC CACGGCGGTT CTGTTCCTGC CCGGACGGGC GTTCTTTACA
CTGGGCCTGC CTGCCTTGCG CAAGGGCGCG CCGGATATGA ACAGTCTTGT GGCGCTTGGG
GCAGGGGCGG CGTGGATCTA TTCCCTTGTG GCGACCTTTG CGCCCGCGCT GTTGCCCGCC
GATGTGCGCG CGGTCTATTT CGAGGCCGCG GCGATGATCG TCACCCTGAT CCTGATCGGG
CGCTGGCTTG AGGCGCGCGC CAAGGGCCGC ACCGGCGCCG CCATCCAGGC GCTTGTGGGT
CTCCAGGCCC GCCATGCGCG GCGTCTCACC AAGGACGGCC AGCCTGAGGA TGTCGAGGTC
GAGGACCTTG CACCCGGCGA CCGCATCTTG GTGCGCCCCG GCGAACGGAT CCCGACCGAT
GGCACAGTGC TGGAGGGCAC CGCCCACGTC GATGAGAGCA TGATTTCCGG CGAGCCGATC
CCGGTTGAGA AAACCGAAGG CGCGCCTGTG ACCGGCGGCA CCGTGAACGG CGAGGGCAGT
CTGACTGTTG CTGTGACTCG CACAGGCGCT GAGACCACGC TGGCCCAGAT CATCCGCATG
GTCGAAGACG CCCAGGGCGC CAAACTCCCG ATCCAGAGCC TCGTGGACAA GGTCACCCTG
CGCTTTGTGC CGGTGGTGAT GGTTCTGGCG GTCCTAACGG TGGGAGTCTG GCTCTTGGTG
GGGCCAGAGC CAAGATTGAC CAACGCCCTT GTGGCGGGCG TGTCGGTGCT CATTATTGCG
TGCCCCTGTG CCATGGGGCT GGCAACCCCC ACCTCGATCA TGGTGGGGAC GGGGCGCGCG
GCAGAACAGG GGGTGCTGTT TCGCAAGGGG GACGCGCTGC AATCGCTTCA TGAGGTCGAT
ATCATTGCCT TTGACAAGAC AGGCACGCTC ACCGAGGGGC GTCCGTCGCT GGTGGCGCTG
CGTCCGACCG AAGGGTTCGA ACGGGCAGAG GTGCTGGCCT CGGTGGCGAC AGTGGAGGCC
CGCTCGGAGC ATCCCATCGC CCGCGCTTTG GTAACGGCGG CACAGGACGA GGGCCTGAGC
CTTGGCGAGG TCAGCAATTT CCAGAGCCTC ACGGCGCGTG GCGTCACGGC TGAGGTGGCG
GGGCGCGAGA TCCGGATCGG CAGCGCGCGC CTGATGTCTG AAGCCGGCAT CAGCGTCGAT
GCGCTGGCCT CCGAGGCGCT GGAACGCGCC GGGCGCGGTG AAAGCGTGCT CTATGCCGCC
ATTGGCGGGC AGTTGGCGGC GCTCCTGGCG GTTGCCGACC CTATCAAACC CACCAGCGCC
GAGGCGATCA AGGCCCTGCG CGCCATGGGC AAGGATGTGG CGATGATTTC CGGCGACGCG
CCCGCCACGG CAGAGGCCAT CGCGCGCGAT CTCGGCATCA GCCATGTGGT TGCGGGCGTC
GCGCCCGAAG GCAAAGTATC CGCACTCAGG GATCTGGCCT CGCGGGGGCG CAAGCTCGGT
TTTGTCGGCG ACGGGATCAA TGACGCACCA GCCCTGGCAC AAGCGGATGT GGGGATTGCC
ATTGGCACCG GCACCGATGT GGCCATCGAG GCGGGGGATG TGGTCCTGAT GTCGGGCGAC
CTGCGCGGTG TCGCGACAGC GATCCAGATC TCGCACAAGA CGCTGGTGAA TATCCGGCAA
AATCTCGGCT GGGCCTTTGT TTACAACGCA GCGCTGATCC CGCTGGCGGC AGGGGCTCTC
TATCCTGCTT TTGGGATCTT GCTCTCACCG GTCTTTGCAG CCGGGGCGAT GGCGCTTTCT
TCGGTGTCGG TGCTCACCAA TGCGCTCCGG CTCAGACGCG CCTGA
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| Protein sequence | MTQPITARLS IEGMTCAGCV GRVDRTLAAL PGLRDVSVNL ANETAQITAE SPEALQQADS
ALRDLGKPAR HQSVQLSIEG MTCGGCVGRV ERAIKALPGV VSANVNLAAE SAQVEILQGV
VTPSEVAAAS TQAGYRARPA EATDTEDRAA RKDREARDLR RQVMIAAALT LPVFLLEMGG
HVVPAVHHWI AQTIGMQTSW VMQALLTTAV LFLPGRAFFT LGLPALRKGA PDMNSLVALG
AGAAWIYSLV ATFAPALLPA DVRAVYFEAA AMIVTLILIG RWLEARAKGR TGAAIQALVG
LQARHARRLT KDGQPEDVEV EDLAPGDRIL VRPGERIPTD GTVLEGTAHV DESMISGEPI
PVEKTEGAPV TGGTVNGEGS LTVAVTRTGA ETTLAQIIRM VEDAQGAKLP IQSLVDKVTL
RFVPVVMVLA VLTVGVWLLV GPEPRLTNAL VAGVSVLIIA CPCAMGLATP TSIMVGTGRA
AEQGVLFRKG DALQSLHEVD IIAFDKTGTL TEGRPSLVAL RPTEGFERAE VLASVATVEA
RSEHPIARAL VTAAQDEGLS LGEVSNFQSL TARGVTAEVA GREIRIGSAR LMSEAGISVD
ALASEALERA GRGESVLYAA IGGQLAALLA VADPIKPTSA EAIKALRAMG KDVAMISGDA
PATAEAIARD LGISHVVAGV APEGKVSALR DLASRGRKLG FVGDGINDAP ALAQADVGIA
IGTGTDVAIE AGDVVLMSGD LRGVATAIQI SHKTLVNIRQ NLGWAFVYNA ALIPLAAGAL
YPAFGILLSP VFAAGAMALS SVSVLTNALR LRRA
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