| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2078 |
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| Symbol | |
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| ID | 4077829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2181427 |
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| End bp | 2182290 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007397 |
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| Product | hypothetical protein |
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| Protein accession | YP_614072 |
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| Protein GI | 99081918 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.280639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCA CTGATCTTCT GCGCCTTGCC GCTCTGGTTT TCACCGCCGT CACCTGTGTT
GTGCTTGGCG ATACCGCAGG TAAAGTGCTG ACCTCGGGCG GTGTGGATCC GGTGATCGTC
GCTTGGGCAC GCTTTGGACT TGGGGCTTTG GTGCTCCTGC CGCTGAGTGG TCTGCGTCTT
ACCGAGCTGT CGATTGCCCG CGACTGGAGG GTCTGGCTCA GGGCAGGCTT TGTCACCGCC
GGGATTTCCT GCATTCTGAC CGCGCTGCGC ACAGAGCCGA TCGCCAATGT GTTTGGCGCA
TTTTTTGTGG GGCCCGGCGT TTCCTATGTG ATTGCGGTCC TGTTCCTGGG CGAGCGCCCC
TCGCCGCTGC GCAGCCTGCT GCTGGGGCTT GGGTTCATTG GCGTCATGCT GGTGGTCAAA
CCCGGGTTCG GCGTGAGCTT TGGGCTGTTC TACGCGCTGG CGGCGGGGTG TTTCTATGGC
GCCTATCTGG CAATGACCCG CACCGTGGCC GGCAGCTATC GACCGCGACT TTTGTTGATG
TCGCAGCTGC TGATCGGCAC GCTGCTGCTG ACCCCGATGG GGCTCAGCGT GGAGATGCCG
ACACTTGACT GGACGATCTT TACGCTCCTG TCGCTGAGCG CGCTCGGTTC GGCAGTCGGG
AACTATATTC TCGTGGTCGT GAACAAAACC GCCGAGGCCT CTCTGATTGC GCCGTTGGTC
TACAGCCAGT TGATTTCGGC AACTGTGCTG GGCGTCGTGG TTTTTGGCGA GTGGCCCGAT
GTGATTTCGC TTTGTGGTCT TGGGCTGATC CTCCTGTCAG GGTTTGGCTC GCTTCTGGCC
CATCAGCGCG CGACGCCGCT CTGA
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| Protein sequence | MHTTDLLRLA ALVFTAVTCV VLGDTAGKVL TSGGVDPVIV AWARFGLGAL VLLPLSGLRL
TELSIARDWR VWLRAGFVTA GISCILTALR TEPIANVFGA FFVGPGVSYV IAVLFLGERP
SPLRSLLLGL GFIGVMLVVK PGFGVSFGLF YALAAGCFYG AYLAMTRTVA GSYRPRLLLM
SQLLIGTLLL TPMGLSVEMP TLDWTIFTLL SLSALGSAVG NYILVVVNKT AEASLIAPLV
YSQLISATVL GVVVFGEWPD VISLCGLGLI LLSGFGSLLA HQRATPL
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