| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2064 |
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| Symbol | |
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| ID | 4077991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2168043 |
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| End bp | 2169287 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638007383 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_614058 |
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| Protein GI | 99081904 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.691956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAA TTCTGGTTCT TGGTGGCGGA ATGGTGGGCA TCTCGACGGC GCTCGAACTG
CAGGCGCGCG GGCACGCGGT CACGGTTGTG GATCGCAAAG CCCCCGGGCA GGAGACAAGC
TATGGCAATG CGGGGCTCAT TCAGGCCGAA GCGGCCGAGC CCTACGCCAT GCCCCGCGCG
CTGCCCGAGA TCCTTGGTAT TCTGTCTGGA CGCAGCAACG ACGTGATCTG GTCCCTGCGC
GGCGTGCTAA GCCAGCTGCC CGCGCTCTGG CAGTATTATC GCTACTCGCA TCCGCACCGC
CATCTCGCCC TGTCGCAGCC CAACGCGCAT CTGATCCGCA CCGCCTGCGC CGATCATGAT
CGTTGGATCA CCGCGGCGGC GGCACAGGAT CTGATCGCGC AGGATGGCTA TCTGTCGGTC
TTTCAGGATG CGGCCATGTT TGACAGCCTG GCCTCTGATC TCGAGCGGCT GCGACAAAGT
TATGGCGTCG AGGCAACGGC CATGAGCGGG CCGCAGCTTT GCAAGATGGA GCCGTTGTAT
CAGCGCCCAC CCGTAGGGGG CATCCATTGG CGCGACGTCT GGAGCTGCGC CGCCCCCGGC
GAACTGGTCG CGCGCTATGC CGCATTGTTC CAGAGCCGGG GCGGAGAGAT TTGTACCGGC
GATGCCAGCA CTTTGCGCCC GGAGGGGTCG GCCTGGGCGC TCATGTCAGA GGCCGGGCGG
CTGCACGGCG AGCATGCCGT GATCGCGCTC GGGCCATGGA CGCCGCCGAT ATTGGCCCAA
CTGGGCTACC GGGTGCGGAT GATCATGAAA CACGGCGCGC ATCGCATGTA TCCCACGGGG
CCCAAGCTGC GCCGCCCCGT GCATGACGCC CAACACGGTA TTGTGCTCTC GAGCATGAAA
GGGGGCTTGC GCATGACCTG TGGCGTGGCG CTGGAGGCCT CTGGCCGGGT GCCGGATGCG
CGCCAGCTGG ATCGAGGCGC CAAAGGTCTT GCCGCCTATA TGGATCTCGG CACTGCCGAG
GGCGGACCGA TCTGGCACGG CACGCGTCCG TTTCTGCCGG ATATGCTGCC GATGGTCGGT
GCCGCCCCAC GCCACGACCG CCTGTGGTTT CATTTTGGGC ATGGGCACCA GGGGTTCACC
CTTGGCCCCA CCACCGCACG TCACCTTGGC GCGCTCATCG ACGGCGGTGA CAGCGCCGGT
ATCGCGGCGC TCCTGCCGCA GAACCGACCG GCTGTTTTGT CCTAG
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| Protein sequence | MSEILVLGGG MVGISTALEL QARGHAVTVV DRKAPGQETS YGNAGLIQAE AAEPYAMPRA
LPEILGILSG RSNDVIWSLR GVLSQLPALW QYYRYSHPHR HLALSQPNAH LIRTACADHD
RWITAAAAQD LIAQDGYLSV FQDAAMFDSL ASDLERLRQS YGVEATAMSG PQLCKMEPLY
QRPPVGGIHW RDVWSCAAPG ELVARYAALF QSRGGEICTG DASTLRPEGS AWALMSEAGR
LHGEHAVIAL GPWTPPILAQ LGYRVRMIMK HGAHRMYPTG PKLRRPVHDA QHGIVLSSMK
GGLRMTCGVA LEASGRVPDA RQLDRGAKGL AAYMDLGTAE GGPIWHGTRP FLPDMLPMVG
AAPRHDRLWF HFGHGHQGFT LGPTTARHLG ALIDGGDSAG IAALLPQNRP AVLS
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