| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2061 |
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| Symbol | |
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| ID | 4077988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2164175 |
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| End bp | 2165095 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007380 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_614055 |
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| Protein GI | 99081901 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAGC TGAGCCTGCG TCACTTGCGA TACTTTGCGG TTCTGAGCCG AGCGCTGCAG
TTTCGACGCG CGGCGCGGCA ATTGGGGATC AGCCAGCCCT CGCTCAGCCT TCAGATCGCC
GCGCTTGAGG AAATCGTCGG CGCGCCGCTG CTGGAGCGGC GGCGCAATGG GTTGATCCTG
ACCGCTGCGG GGCGAGATGT GGCCGCCAGG GCGGAGCGTA TTCTGGCCGA TTGCGAGCTG
CTGGTGAACG CGTCGGCCAC CCGCCGCGCA GGGTTGAGCG GCACATTGCG GTTGGGATCG
TCTCCCACCA TTGGACCCTA TATTCTGCCA CAGGTGCTCA AGCGTCTGCA TGAGACCTAT
CCCGATTTCC GGCTCATCAT TCGCGATGGC CCTTCGCGCG ATTTGTTGGA GGATCTGGTT
GCGGGCAAGC ATGATCTCAT CCTGACCCAA GCGCCGATCC AGCGCGATGA CATCCGTTTT
CACCCGCTGT TCCGCGAGCC GCTCTATCTT GTGGTGCCGC GGGGTCATCC GCTTGCAACG
GCGGGTGTCG CCCGCCGGCG TGATCTGGGG CAGGAACAGT TTCTCAGCCT CAACCCCGCC
TATGCGCTGC GGCGGCAGGT GGAGGGGCTG GCGCAGACGG TTGGCGCGCG GATGCAGGAC
GACATTGATG GCACCAGCCT CGACGCGATC CGCCAGATGG TTGCGCTCGG CATGGGGGTG
ACGCTGATGC CGCAGTCCTA CACGCGCTCC GAAATCGACA ACCGCAAGGA TGATGTCTGC
GTGGTCACCC TGAAGCCAGG CCTAGAGCGC CATATCGGCC TTGCGTGGCG CGTCTCCAGT
GGCAACCCGG CGAGCTTTGA AGAACTGGCA GAAGCCATTG CTGTGATGGG CAAAACAGAC
CCCAAGGCCG CCATCACTTG A
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| Protein sequence | MPELSLRHLR YFAVLSRALQ FRRAARQLGI SQPSLSLQIA ALEEIVGAPL LERRRNGLIL
TAAGRDVAAR AERILADCEL LVNASATRRA GLSGTLRLGS SPTIGPYILP QVLKRLHETY
PDFRLIIRDG PSRDLLEDLV AGKHDLILTQ APIQRDDIRF HPLFREPLYL VVPRGHPLAT
AGVARRRDLG QEQFLSLNPA YALRRQVEGL AQTVGARMQD DIDGTSLDAI RQMVALGMGV
TLMPQSYTRS EIDNRKDDVC VVTLKPGLER HIGLAWRVSS GNPASFEELA EAIAVMGKTD
PKAAIT
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