| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2059 |
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| Symbol | |
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| ID | 4077986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2162703 |
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| End bp | 2163857 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638007378 |
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| Product | Rieske (2Fe-2S) region |
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| Protein accession | YP_614053 |
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| Protein GI | 99081899 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC CAGTCTCACT TCAGTCTGTC CTCACGTCGG TCAATCGCGC CAACGGGCTG
CCCAATGCGC ATTACATCGA CCCGGTGGTC TTTGCCGAGG AGCGCGCTGC AGTGCTGTTT
GCCAATTGGT CCGGCGTGGG TTTTGGCAAG GACATCCCCA ACCCCGGCGA TGCAAAGCCC
GTGGATTTCC TCGGTGTGCC GCTGTTGCTG GTGCGCGATC ACGATGGCGG TGTCCATGTC
TATCAAAACA CCTGCCGGCA CCGGGGCATG ATCCTTGTGG AAGAAGCCAA GAACATCCGT
GGCACCATCC GCTGCCCCTA TCACAGCTGG TGCTACAGCC TGAAAGGCAA GCTGCGCGCT
GCACCCCATG TGGGCGGGGT TGGCCAGAAC ACCCATGCCG ACGTAAAGAT GGACGAATTG
AGCCTCGTCT CTTTTCGCGC TCATGTCTGG CAGGACGTGA TCTTTGTGAA TATCGACGGC
AAGGCCGCGC CCTTTGAGGA GGTGCATGCG GACCTTCTGC AACGCTGGCA GGAATTCGAC
CGCCCCTTGC ACCACGGCGG ACCGGAAAGC TCGCTGAAGT TGGAAGTCAA AACCAACTGG
AAGCTCGCGG TGGAAAACTA CTGCGAGAGC TATCATCTGC CTTGGGTGCA TCCTGGTCTC
AACAGCTACT CGCGACTAGA AGATCACTAC AATATTGAAA AACAAGGAAA ATACTCCGGC
CAAGGAACGT TGGTCTATCG CCAGCTGCGC GGGGCCGAGG ATGAAGTCTT TCCCGATTTC
GAAGGGCTCA GCGACAAATG GGAGACCGGC GGAGAATATG TCGCGCTCTA TCCCAACGTC
CTCTTGGGGG TTCAGCGCGA CCATAGTTTC GCAATCGTCC TGGAGCCCAA GGGATGCGAG
GAAACGGTCG AGCACATCGA GCTCTACTAC GCAAAATCAA GCGCCGAGAC ACCCGAGCTG
GACCCGTTGC GCCATCAGAA TGCGCAGCTC TGGAAGACCG TTTTTGAAGA AGACGTCTTT
GTGGTCGAGG GCATGCAGAA GGGGCGGCAT GGGCCGATGT TCGACGGCGG GCGTTTCTCC
CCCGCGATGG ACGGGCCAAC GCATAATTTT CACCATTGGG TTGCCACCCA GATCGAGGCT
GCGCGCGCCT CATGA
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| Protein sequence | MTKPVSLQSV LTSVNRANGL PNAHYIDPVV FAEERAAVLF ANWSGVGFGK DIPNPGDAKP
VDFLGVPLLL VRDHDGGVHV YQNTCRHRGM ILVEEAKNIR GTIRCPYHSW CYSLKGKLRA
APHVGGVGQN THADVKMDEL SLVSFRAHVW QDVIFVNIDG KAAPFEEVHA DLLQRWQEFD
RPLHHGGPES SLKLEVKTNW KLAVENYCES YHLPWVHPGL NSYSRLEDHY NIEKQGKYSG
QGTLVYRQLR GAEDEVFPDF EGLSDKWETG GEYVALYPNV LLGVQRDHSF AIVLEPKGCE
ETVEHIELYY AKSSAETPEL DPLRHQNAQL WKTVFEEDVF VVEGMQKGRH GPMFDGGRFS
PAMDGPTHNF HHWVATQIEA ARAS
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