| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2049 |
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| Symbol | |
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| ID | 4077976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2153152 |
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| End bp | 2153940 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007368 |
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| Product | RNA methyltransferase TrmH, group 3 |
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| Protein accession | YP_614043 |
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| Protein GI | 99081889 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGA AATCCAACAA GAAACCCGCT TGGGTCGTGG AGAAGGAAAA GGCCAAAAAG
GCGGCGGCAT CCGAGACCGT CTGGCTCTTT GGTCTGCATG CGGTGCGGGA TGCGCTTTTG
AACCCCAAAC GTGAGAAGCT ACGCCTTGTG GTGACGCTCA ATGCGCAGAA CAAACTGGAG
GATGCCATTG CGACCTCTGG CATCACGCCC GAGGTGGTGG ACCCGCGCAA ATTCTCGGTA
CCGATTGATC CGGGCTCTGT ACATCAGGGC GCTGCACTCG AGGTCAAGCC TCTGAACTGG
GGCGGGCTTG AGGACAATTG TATCGGGGCC GAAGTGCCGC GCGTGATCCT TCTGGACCGG
GTAACTGATC CGCACAATGT CGGCGCGATC CTGCGCTCTG CAGAGGTGCT GGGTGCATCG
GCGGTGATCG GCACCCGGCA TCACTCCGCA CCGGAAACCG GTGCGCTCGC CAAGACGGCA
TCGGGCGCGC TTGAACGTCA GCCCTATCTC AGAATGCGCA ATCTCTCCGA TACCATCGTG
GCACTGCAGC AGATGGGGTA TCTGGTGCTT GGCCTTGATG GCGAGGCAGA AGAGACCATC
GAGGAGGCGG TCGCCGGGCG CACCAAAGAG CCGATCGCGC TGGTCCTGGG CGCCGAAGGT
CCCGGTCTGC GACAAAAAAC CAAGGAAACC GTGGACAAGC TTGTCAAAAT CGATGCCGCG
CGCGGTTTTG GCTCCTTGAA TGTTTCAAAT GCCGCTGCAC TCTCCCTATA TGCATCTTTG
AAGGGTTAG
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| Protein sequence | MNKKSNKKPA WVVEKEKAKK AAASETVWLF GLHAVRDALL NPKREKLRLV VTLNAQNKLE
DAIATSGITP EVVDPRKFSV PIDPGSVHQG AALEVKPLNW GGLEDNCIGA EVPRVILLDR
VTDPHNVGAI LRSAEVLGAS AVIGTRHHSA PETGALAKTA SGALERQPYL RMRNLSDTIV
ALQQMGYLVL GLDGEAEETI EEAVAGRTKE PIALVLGAEG PGLRQKTKET VDKLVKIDAA
RGFGSLNVSN AAALSLYASL KG
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