Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2016 |
Symbol | |
ID | 4077473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2119057 |
End bp | 2119404 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638007331 |
Product | hypothetical protein |
Protein accession | YP_614010 |
Protein GI | 99081856 |
COG category | [S] Function unknown |
COG ID | [COG5462] Predicted secreted (periplasmic) protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAACCC TCGCCTATAT GATGACGATC CTCGCGGTCT TTGGTCTGGC GTTCTGGGCC TACCGCGAGA ATTACGCCAC CCAGCAGGTG CTCAAGGAAA CCCGCGTCCT GCGCAGTGAC ATCGCCGATG CGCAGGTGCG CCTGAGCGTG CTGCGCGCCG AATGGGCCTA TCTCAACCGT CCCGACCGTT TGCGGGACCT GGCCGAGCTC AACTTTGAGC GCCTTGGCCT GCTGCCACTG CGCCCGGAAC AATTTGGACG CGTGGACGAG GTGTCCTTTC CGCCCTCGGG TCTGGTGATC GAAGAAGGCG TCGAGGTCTC CTCTTATGGA CAGGAGGCCG ATCAATGA
|
Protein sequence | MRTLAYMMTI LAVFGLAFWA YRENYATQQV LKETRVLRSD IADAQVRLSV LRAEWAYLNR PDRLRDLAEL NFERLGLLPL RPEQFGRVDE VSFPPSGLVI EEGVEVSSYG QEADQ
|
| |