| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1952 |
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| Symbol | |
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| ID | 4076902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2055091 |
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| End bp | 2056218 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007267 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_613946 |
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| Protein GI | 99081792 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5616] Predicted integral membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.106367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0284663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCTTTC GCGTCCTTCA CTTTGCCGAG CCCGAAGAGA CGGTCTTTGC CGAGGGCATC
TCGGAGGACA TCACAACCGA GCTATCGCGG TTTCATGCCA TTCGGATCAC ATCCCGGATG
TCGTCCTTTC AGTTTAATGC CTCAGAGCGA CCAGCTCAGG AGATCGCAAC AACGCTCGGG
GCGGACTTCA TTCTGTCAGG AACGGTGCGC CGCGCATTGA ACCGTATCCG AGTCGTGGTC
GAACTCTATG AGACGCTGGA AGATCGGCAA ATCTGGTCCG AGCGCTTCGA CCGTGCCGAC
GCCGACATAT TCGCGGTCCT CGACGAGATT TCCGGCCTTG TCGCTGCCTG CATGACAGGC
GAGGTTCAAC TGGCCGAGAC CCGGCGGACA AAGGCCAAAG CCGGCCAAGA CCTAACCGCC
TATGAGGCGC TTCTTGTCGG GCAGGACCTG CACAAAAGCG GTGATATCAG CCCACGCGTG
GCCACACGTG CGGTCGCAGC CTTTTCAGAG GCGATCGACG CGGCGCCCGA CTTTGCACGC
GCCTACGCCT GGCGGGCCTG TTCCTTCTCA CGCACGTGGG ATTTCCCGGT GCGGCAAGAT
CAGTTCGATC AGGTTTCACA GGATGTCTTC AAGGCGCTGG AGTTCGACCC GGCAGAGGCG
GAGGCTCATC GTATCGCAGG CGCCGTCTGT CGTGCGCTGC ATGAGTTTGA CCGCGCGACT
TTGCATATCG AAAAGGCGCT CGAGCTTAAT GCGAGTGATG CCCATATCGC CGCGAAATCG
GCCGAGCATT TTGCGTTTAT CGGACAGCCC CAGCGCGCGC ATGACCTCAT CAACAAGGCG
ATGGCGCTCA ACCCGATGTT CTCGGGCTGG TACTGGGAAA TTATTGCCCT CGCCGACTAT
GTGGCGAGCC AATATGAGGA GGCGCTTGCC GCAATCACGC GCGCTGCGAG CCCGACATTC
GCCGGGTTTG CCTATCAGGT AGGCTCCCTC TTGGCGTTGG GCCGTACCGA GGAGGCCAAA
GAAGCGGTTG CGCTTTTGAA AGCGCAATAT CCAGACGTGA CGCTTGCCGT TTATCAGCGC
GACGGGCGCC GCTTTGCCTT TGCAGACGGC CAACCACAAA AGGTTTGA
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| Protein sequence | MPFRVLHFAE PEETVFAEGI SEDITTELSR FHAIRITSRM SSFQFNASER PAQEIATTLG
ADFILSGTVR RALNRIRVVV ELYETLEDRQ IWSERFDRAD ADIFAVLDEI SGLVAACMTG
EVQLAETRRT KAKAGQDLTA YEALLVGQDL HKSGDISPRV ATRAVAAFSE AIDAAPDFAR
AYAWRACSFS RTWDFPVRQD QFDQVSQDVF KALEFDPAEA EAHRIAGAVC RALHEFDRAT
LHIEKALELN ASDAHIAAKS AEHFAFIGQP QRAHDLINKA MALNPMFSGW YWEIIALADY
VASQYEEALA AITRAASPTF AGFAYQVGSL LALGRTEEAK EAVALLKAQY PDVTLAVYQR
DGRRFAFADG QPQKV
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