Gene TM1040_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1940 
Symbol 
ID4076891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2044201 
End bp2044836 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content57% 
IMG OID638007256 
Productintracellular septation protein A 
Protein accessionYP_613935 
Protein GI99081781 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2917] Intracellular septation protein A 
TIGRFAM ID[TIGR00997] intracellular septation protein A 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.566352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.148621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC AGACAAGTGA TCCAAGCCCG GCGGCGCGCA AGATAAGCCC CCTGGTCAAG 
AACTTATTGG AGTTCGGCCC GGTTGTTCTG TTCTTCGTGG CGTATCTGAG GCTCAAGGAT
CAGGTGTTTG AGATCGGCGG CACCTCCTAT GAGGGGTTCA TCGTTGTGAC CGCAGGCTTT
GTACCGCTGA TGATCCTCTC GACGCTGATC CTGTGGCGGC TTACGGGCAA ACTCTCGCGC
ATGCAGGTGA TGACGCTGGT GCTGATTGTG GTCTTTGGCG GGCTCTCGGT CTGGTTCAAC
GACGAGCGCT TTTTCAAGAT GAAGCCGACG ATGATCTACC TGCTCTTTGG CGGCATGCTG
GGCGTGGGGC TTTTGCGCGG TCAGAGTTAC CTGCGTGTGG TGATGGAAGA GATGATGCCG
CTTCAGGACG AGGGGTGGAT GATCCTCACA CGTCGCCTCT GTGCGTTCTT CTTTGGGCTG
GCGGTCGCCA ATGAGGTGAT CTGGCGCATG ATGAGCACGG AAACCTGGGT CTATTTCAAG
ACCTTCGGTC TGACGGCTGC GATGTTCCTG TTCTTCATGA CTCAGGCTCG GCTGTTCCAG
ATCTACGGGC TCGAGGAACA GGGCGAGGCC GAGTAG
 
Protein sequence
MSEQTSDPSP AARKISPLVK NLLEFGPVVL FFVAYLRLKD QVFEIGGTSY EGFIVVTAGF 
VPLMILSTLI LWRLTGKLSR MQVMTLVLIV VFGGLSVWFN DERFFKMKPT MIYLLFGGML
GVGLLRGQSY LRVVMEEMMP LQDEGWMILT RRLCAFFFGL AVANEVIWRM MSTETWVYFK
TFGLTAAMFL FFMTQARLFQ IYGLEEQGEA E