| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1935 |
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| Symbol | |
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| ID | 4076886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2037616 |
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| End bp | 2039064 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007251 |
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| Product | cation transporter |
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| Protein accession | YP_613930 |
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| Protein GI | 99081776 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.27929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGATC TGCGCCCCGT CGGATATGTC ATTGGCCTGC TCGTCGTCAT TTTGGGCGGC
ACCATGGTTT TCCCACTCCT CCTTGATCTT TACGATGGCA AGGGGGAGTG GCCTGTGTTT
CTCGAAAGCG CCCTCTTCTG TTTTCTGGTC GGAGGGGTTT TGGCCTTGAC CTGCGCCAAT
GGGGTAGGGC GGGGATTGTC GATCCGCCAG ACCTTTTTGC TCACCACATT GGTCTGGGTG
GTGCTGCCGA TTTTTGGCGC GTTGCCCTTG ATGCTGGGGG CAACCGAACT GAGTTTCACG
GATGCTTTTT TTGAGGCGAT GTCGGGGCTG ACGACCACCG GGTCAACGGT GATCTCGGGG
CTTGATGATC TGCCGCGTGG TCTGTTGCTG TGGCGGGGCA TCCTGCAATG GCTGGGTGGC
ATTGGTATCA TTGTGGTCGC CATGGTGTTC CTGCCGGAGC TCCGGGTTGG GGGCATGCAG
ATCTTTAAAT CCGAAGCCTT TGACACGATG GGGAAAATCC TCCCGCGTGC ACAGGAAATC
GCCAAGCAGA TCTCGGTGAT CTACCTGGTG CTCACATTGG TCTGTGCGCT GGTTTACACG
GTTCTGGGTA TGGGGCTTTT TGATGCGGTG GTGCATGCGA TGACCACCAT GTCGACGGGC
GGGTTCTCCA ATTACGACGC GTCTTTTGGC ACGTTTTCCG GTCCGGCGGA GTATGCCGCC
GCCATCTTTA TGGTGGTCGC GGCTCTGCCG TTTGTGCGCT ATGTGCAGAT GGTCAACGGC
AAGACCCTGC CGCTGTTTCA GGACTCGCAG GTGCGGGCCT TCATGGCGAC GATCCTTTTG
CTTGTGGCCA TCACCGCCGG GGTGCTTGTG ACCATCTTTC CGCATCATCC CGAGCAGGCC
GTGCGCGAGG CCCTGTTCAA CATCATCTCC ATCATGTCCG GAACCGGTTA TGCCAGTGTC
GACTACATGG CCTGGGGGCC GTTCCTGATC ATGATCTTCT TCTTTATCGG GCTCATTGGG
GGCTGCGCGG GCTCGACCGC CTGTTCGGTG AAGATCTTCC GCTACCAGCT TCTCTTTGCC
TCGATCAGGG TGCAGGTGCA GCGCATCCGC TCGCCCAACG GGGTCTTTGT GCCGCGCTAT
GAGGGGCGAC CGGTCACGCC CGATGTTCTA AGCTCGGTGA TCTCGTTTTT CATGTTCTTC
GTCATCACGC TGGGCATCGT GGCCTGGGCG CTCGCGCTGA CGGGGCTCGA CTTCATCACC
GCCATCTCGG GAGCAGCAAC AGCGGTTGCC AATATCGGTC CCGGTCTTGG AGATATCATC
GGGCCTGCGG GGAACTTCGC CCCGCTCAAT GACACCGCCA AGTGGATTTT GGCCATCGCA
ATGCTGATCG GGCGACTGGA GCTGATGGCG GTTTATGCGA TCCTGACGGT TCGTTTCTGG
CGCAGCTAG
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| Protein sequence | MLDLRPVGYV IGLLVVILGG TMVFPLLLDL YDGKGEWPVF LESALFCFLV GGVLALTCAN
GVGRGLSIRQ TFLLTTLVWV VLPIFGALPL MLGATELSFT DAFFEAMSGL TTTGSTVISG
LDDLPRGLLL WRGILQWLGG IGIIVVAMVF LPELRVGGMQ IFKSEAFDTM GKILPRAQEI
AKQISVIYLV LTLVCALVYT VLGMGLFDAV VHAMTTMSTG GFSNYDASFG TFSGPAEYAA
AIFMVVAALP FVRYVQMVNG KTLPLFQDSQ VRAFMATILL LVAITAGVLV TIFPHHPEQA
VREALFNIIS IMSGTGYASV DYMAWGPFLI MIFFFIGLIG GCAGSTACSV KIFRYQLLFA
SIRVQVQRIR SPNGVFVPRY EGRPVTPDVL SSVISFFMFF VITLGIVAWA LALTGLDFIT
AISGAATAVA NIGPGLGDII GPAGNFAPLN DTAKWILAIA MLIGRLELMA VYAILTVRFW
RS
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