Gene TM1040_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1929 
Symbol 
ID4076880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2028463 
End bp2029653 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content61% 
IMG OID638007245 
Producttoxic anion resistance 
Protein accessionYP_613924 
Protein GI99081770 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3853] Uncharacterized protein involved in tellurite resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.414661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.613644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAA CGATTCAACA AAAAGCAGTA GAAGCCGAAA CGCTGGTGAA GGAAGTAACC 
GAAGTGTCCC TGCCCGACCC CAAGGGCGAG CTGGCCACGC TCGAGGCCGC CGACCCGGAA
ACCACCACAG CGATCCGCCG CCGCATCGAC GAGATCGACA TGGGCGATAC CAATTCGATC
ATCTCCTTTG GCTCTGCCGC GCAGGGTGAA CTGCAACAGA TCTCGCAGGC GATGCTGACG
GATGTGCGCA ACAAGGACGT GGGGCCTGCA GGTGACTCCC TGCGCGAGAT CGTCACCACC
ATCCGCGGCT TTTCCGTCTC TGAACTCGAC GTGCGCCGCA AACCAACCTT CTGGGAACGT
CTTCTGGGGC GCGCGGCCCC CTTTGCCAAG TTCACCGCCC GTTATGAAAG CGTGCAGGGG
CAAATCGACA AGATCACCGA TAGCCTTCTG GCGCATGAGC ATACGCTCCT GAAGGACATC
AAGTCCCTCG ACGTTCTCTA TGAAAAGACG CTGAATTTCT ACGACGAGCT GGCGCTCTAT
ATTGCGGCGG GCGAGGCAAA GCTGGCCGAG CTCGACAGCA CCGAAATCCC CGCGCTCGAG
GCAGCTGTGG AAGCCGCGGC TGAGAACGAT CAGGTCATCA AGGCGCAGGA GCTGCGCGAC
CTGCGCGCGG CCCGCGACGA TCTGGAACGC CGCGTGCACG ACCTGAAACT CACGCGTCAG
GTGACGATGC AGTCCCTGCC CTCTATCCGA CTGGTGCAGG AAAACGACAA GTCTCTGGTC
ACCAAGATCA ACTCCACGCT CGTCAATACC GTGCCGCTCT GGGAGACCCA GTTGGCGCAG
GCTGTCACGA TCCAGCGGTC TGCCGAGGCC GCAAATGCGG TGCGCGATGC CAACAACCTC
ACCAATGAAC TGCTGACCGC CAATGCCGCA AACCTGCGCG AGAGCAACAA GGTCATCCGC
GAGGAAATGG AGCGTGGCGT CTTTGACATC GAAGCGGTCA AACAGGCCAA TGCCGACCTG
ATCGGCACCA TCGAGGAAAG CCTGCAGATC GCCGATGAGG GCAAGCGCAA GCGGGCCGAG
GCCGAGGCCG ATCTGAAGAA AATGGAAGCC GAGCTGCGCG ACACGCTGGC AGCTGCCAAA
GCGCGCAAGG ATGGGGTCGG CGACACGGCG GCCACCTCGG TTCCAAAGTG A
 
Protein sequence
MSETIQQKAV EAETLVKEVT EVSLPDPKGE LATLEAADPE TTTAIRRRID EIDMGDTNSI 
ISFGSAAQGE LQQISQAMLT DVRNKDVGPA GDSLREIVTT IRGFSVSELD VRRKPTFWER
LLGRAAPFAK FTARYESVQG QIDKITDSLL AHEHTLLKDI KSLDVLYEKT LNFYDELALY
IAAGEAKLAE LDSTEIPALE AAVEAAAEND QVIKAQELRD LRAARDDLER RVHDLKLTRQ
VTMQSLPSIR LVQENDKSLV TKINSTLVNT VPLWETQLAQ AVTIQRSAEA ANAVRDANNL
TNELLTANAA NLRESNKVIR EEMERGVFDI EAVKQANADL IGTIEESLQI ADEGKRKRAE
AEADLKKMEA ELRDTLAAAK ARKDGVGDTA ATSVPK