| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1904 |
|---|
| Symbol | |
|---|
| ID | 4077401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2006318 |
|---|
| End bp | 2007706 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638007220 |
|---|
| Product | magnesium transporter |
|---|
| Protein accession | YP_613899 |
|---|
| Protein GI | 99081745 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) |
|---|
| TIGRFAM ID | [TIGR00400] Mg2+ transporter (mgtE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAG GCGAGAACAC CCCCGAAGCA GAAACCATGG GCGAGGACGC CTACGAGTTG
GACAGAAAGC GGGTCGCGCA GATCCTCTTT GCGCTGGATC GCGACGACCG CGATGCGCTT
GTGGAACTGA TGGATCCACT GCACCCGGCT GATATTGCGG ACCTTCTGGA ACAGATCAAC
GCTTACGACC GGGGCCGACT GATCCGCCTC TATGACAAGG AGTTTGACGG CGACATCCTG
TCGGAGCTGG ATGAATCCAT CCGCGAGGAG GTCATTGCGG CGCTGAACCC CGAGGTTCTG
GCCGATGCGG TGCGCGATCT CGACAGTGAC GATGTGGTCG ATCTGCTCGA AGATCTCGAA
GAGCCCCAGC AAGAGGCGAT TCTCGACGCG CTGGAAGACA GCGACCGCGT CGCGATCGAG
CAATCTCTGT CCTACCCTGA AAACTCTGCC GGGCGTCTGA TGCAGCGTGA GGTGGTCACC
GCACCCGAGC ATTGGACCGT TGGGCAGGCC ATTGACCACA TGCGCGAGGC CGAGGAGCTG
CCCGAACAGT TCTATCATGT GGTGATCGTG GATCCGCGCA TGCATCCGAT CGGGCAGGTC
ACTCTTGGGC GATTGATGAG TTCGCGCCGC ACCAAACCGC TGATCGAGAT CCTCGAGGAG
ACCTTTCAGG TCATTCCCGT GGGCCAGGAC GAAGAGGACG TGGCCTATGC CTTCAACCAG
TATCACCTGA TATCGGCGCC GGTGGTGGAC GAGGGCGGCC GTCTGGTCGG CGCCATCACC
ATCGACGATG CGATGGCGGT TCTGGACGAG GAACACGAAG AAGACATCCT GCGTCTGGCC
GGTGTCGGCG AGGGGAGCCT GTCGGATCGG GTCTCCGAGA CCACCAAGCA GCGCTTCCCG
TGGCTGGCGG TCAATCTGGT GACGGCGATC TTTGCCTCTC TGGTGATTGC GCAGTTCGAG
GCGACGATTG CGCAATTTGT GGCGCTGGCG GTGCTTATGC CCATCGTGGC CTCGATGGGC
GGCAATGCAG GCACGCAGTC TCTTACGGTG GCGGTGCGCG CGCTTGCCAC ACGAGATTTG
ACCGGATCAA ACGTCTGGCG TGTGATCCGA CGCGAGGTAC TGGTGGGGCT CATCAATGGC
GGGATCTTTG CCGTGGTAAT GGGCGTCATC GGCGTTGTGT GGTTCGGCAC GCCGATGCTC
GGTGTGGTGA TCGCTGCCGC AATGGTGATC AACCTTGTCG TCGCCGGGCT CGCAGGGACC
GTGATCCCGG TTATTCTGGA CCGAATTGGG ATCGACCCGG CGCTCGCCTC GGGGGCATTT
GTGACCACGG TGACGGATGT TGTGGGATTT TTTGCCTTCC TGGGCCTTGC GGGGGCGGTC
TTGATCTAA
|
|---|
| Protein sequence | MTTGENTPEA ETMGEDAYEL DRKRVAQILF ALDRDDRDAL VELMDPLHPA DIADLLEQIN
AYDRGRLIRL YDKEFDGDIL SELDESIREE VIAALNPEVL ADAVRDLDSD DVVDLLEDLE
EPQQEAILDA LEDSDRVAIE QSLSYPENSA GRLMQREVVT APEHWTVGQA IDHMREAEEL
PEQFYHVVIV DPRMHPIGQV TLGRLMSSRR TKPLIEILEE TFQVIPVGQD EEDVAYAFNQ
YHLISAPVVD EGGRLVGAIT IDDAMAVLDE EHEEDILRLA GVGEGSLSDR VSETTKQRFP
WLAVNLVTAI FASLVIAQFE ATIAQFVALA VLMPIVASMG GNAGTQSLTV AVRALATRDL
TGSNVWRVIR REVLVGLING GIFAVVMGVI GVVWFGTPML GVVIAAAMVI NLVVAGLAGT
VIPVILDRIG IDPALASGAF VTTVTDVVGF FAFLGLAGAV LI
|
|---|
| |