| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1892 |
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| Symbol | |
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| ID | 4077389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1993025 |
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| End bp | 1993882 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007208 |
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| Product | hypothetical protein |
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| Protein accession | YP_613887 |
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| Protein GI | 99081733 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3904] Predicted periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.769847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCAG TGCCCCACCT CCCCAAAGGA TCGTTTGCCC ATAGCGTCTG GCTGCATCTG
GTGTTGCCGC GTGCCGCAGT TCTTGCCGCG CTCTGGGCCA TGAATCAGAG CCTGCAGCTG
CCGATCTGGC TGGTCTACCC GGCAGCGGTT CTGGATGCGG GGTTTCTGGT CTGGCAGCTC
TGGCGTTATC ATCAGGCCGC CGAAGCCCAT ATCCGCGACA CCGGCGCAAT GGCGCCGAGT
TGGGGCGGGT ATCTGCTGTG TCTGCTGGCG CTGTTATCAA GCGCAACCCT CTGGTGGGAC
ACGGTTTTGA TCGCCAACAT GCCGCCCCCC GAGGAACAGC ACAGCGAACA GATGCGCCGG
GCGCGCGAAG CGCTGTATCA ACTCACCCTC AGCGCCGATG GGCGCACAGT GCAATTTGAG
GGCGAGATCA CCTATGGGCT GAAGGCGCGG CTGGCGCAGA TCGTAGAGAA CGCTCCGGAT
CTGCGCGTGA TCCATCTCGG CAGTCCGGGT GGGCATGTCT TTGAAGCGCG CGGTGCGGCG
CAGGTGATCA TGGGCGCGGG TCTCGAGACA ACGGTGAGTG AAGCCTGCAG TTCGGCCTGC
ACGCTTTTGT TCATGGCCGG AACACGGCGC CACCTCGACC CGCAGGCGCG GCTCGGGTTT
CACGGCTACG GCCTCAGTGA ATGGGTGCAT TTACCCGGCT ATGACATTGA TGCGGCGCAG
GAAAAAGACC GCGTCTTCTT TTTGGCGCAG GGAATGCAGC CCGGGTTTGC GGCGCGGATC
TTTGACCGCC CCCCCGAAGA GATGTGGTAC CCCGATCATG CTGAACTGCG CGCCGCAGGG
GTTCTAACGT CCCCGTAG
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| Protein sequence | MLSVPHLPKG SFAHSVWLHL VLPRAAVLAA LWAMNQSLQL PIWLVYPAAV LDAGFLVWQL
WRYHQAAEAH IRDTGAMAPS WGGYLLCLLA LLSSATLWWD TVLIANMPPP EEQHSEQMRR
AREALYQLTL SADGRTVQFE GEITYGLKAR LAQIVENAPD LRVIHLGSPG GHVFEARGAA
QVIMGAGLET TVSEACSSAC TLLFMAGTRR HLDPQARLGF HGYGLSEWVH LPGYDIDAAQ
EKDRVFFLAQ GMQPGFAARI FDRPPEEMWY PDHAELRAAG VLTSP
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