| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1887 |
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| Symbol | |
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| ID | 4077384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1987499 |
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| End bp | 1988431 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007203 |
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| Product | hypothetical protein |
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| Protein accession | YP_613882 |
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| Protein GI | 99081728 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATG TATCCCAGAC CAAAGCCCCG GCCACAGAGC CCACCTCCAA TCCGATGCGC
GGCGTGTTCT GGATGCTGGT GACGGGGCTG AACTTTGTCG CGGTCACGGC GCTCGTCAAA
TACATGGGCC CACGCATTCC CCCCGCCGAG AGTGCCTTTC TGCGCTATCT GCTGGGGCTG
GTGTTCCTGA TCCCGATGAT CCGCTCGATC AAGGCGGTGG AGTGGACGTC CCAATTGCAT
GGTCTCTTTG CGCTGCGCGG CGCGGTCCAT GCGCTCGGTG TGATCATGTG GTTTTTTGCC
ATGACCCGCA TCCCGCTGGC CGAGGTCACA GCGATGAATT ACCTCTCGCC CGTCTATGTG
ACACTGGGAG CGGCGATCTT TATGGGCGAA AAACTCGCCT TTCGCCGCAT TGCAGCCGTC
GGGGTGGCGC TTCTTGGGGT GGTGGTGATC CTGCGCCCGG GCTTTCGCGA GGTGTCGCCG
GGGCATCTGG CAATGCTCAT CACTGGCTTT GCCTTCGGAC TCTCATACCT CTTGGCCAAA
ACCATGGTCG GGCGCACCAA TCCCACCGTT GTGGTGGCGA TGCTGTCGAT CTGGGTGACC
ATCGGACTTG CGCCCTTTGC ACTGGCCAAC TGGGTCACGC CGACCCTCTT TGAACTGGCG
CTGCTCTTTG GGGTCGCCTG TTTTGCCACC GCTGGCCACT ATACGATGAC GCTGGCCTTT
GCCTCGGCGC CGCTGACGGT GACACAGCCG GTGACCTTCC TGCAGCTGAT CTGGGCCACG
CTTCTTGGCG CGCTGGCCTT TGGCGAAAGC GTCGATGTCT GGGTGGTCGT GGGCGGCACC
ATGATCCTTG GCGCGGTGAC CTTCATCACC TGGCGCGAGG CGATGGTAAA GCGGCGCGCC
ATCACCCCCG CCCCGCATGC CACAAAGTCC TGA
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| Protein sequence | MSDVSQTKAP ATEPTSNPMR GVFWMLVTGL NFVAVTALVK YMGPRIPPAE SAFLRYLLGL
VFLIPMIRSI KAVEWTSQLH GLFALRGAVH ALGVIMWFFA MTRIPLAEVT AMNYLSPVYV
TLGAAIFMGE KLAFRRIAAV GVALLGVVVI LRPGFREVSP GHLAMLITGF AFGLSYLLAK
TMVGRTNPTV VVAMLSIWVT IGLAPFALAN WVTPTLFELA LLFGVACFAT AGHYTMTLAF
ASAPLTVTQP VTFLQLIWAT LLGALAFGES VDVWVVVGGT MILGAVTFIT WREAMVKRRA
ITPAPHATKS
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