| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1885 |
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| Symbol | |
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| ID | 4077382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1985642 |
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| End bp | 1986232 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007201 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_613880 |
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| Protein GI | 99081726 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03384] transcriptional repressor BetI |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTA AACGCATTCG CGACATCCGC AACGAAGAGC TTATTGAAGC AACGATCATC
ACCGTCCACA AACGTGGCTA CGGGACTGTA ACCATGGCGG AAATCGCGCG TGAAGCCGGG
GCTTCGGCAG CGTCGATCAG CTATTATTTC GGCTCCAAGG AAGGGCTGAT GGAAGCCACA
ATGCGACATC TGTTGCGCAA GCTGCGCAAG GCGATGGTCG AGGGCTATGC GCAGGCCCGA
TCACCACTGG AGCGGCTCTA TGCAGTGATG GATGCGAACT TTGCAGATTC GCTGTATAGC
GTGCCGCAAT GCAGCATCTG GATGCAGTTC TGGGCCAATG CGCCCTACTC TCCCAGTCTT
GCCCGGCTGC ACCGGATCAA CCGCGCGCGG GTGCGCAGCC ATTTTGTCGC CGAGTTGAGC
CAATTGGTGC CCGCCGATCA GGTGGAAACC GCGCGCCAGG CCCTGCAGAG CTATATGGAT
GGCGTCTGGC TGCAGGCCGC GCAATCGGAA CAGCCGCTGG ACACTGAGGC GGCCCGCACT
GCGGCGCATC GGGTGGTGGA TCTCGTCACC TCGCGCGCGC TGGCGGCCTA A
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| Protein sequence | MARKRIRDIR NEELIEATII TVHKRGYGTV TMAEIAREAG ASAASISYYF GSKEGLMEAT
MRHLLRKLRK AMVEGYAQAR SPLERLYAVM DANFADSLYS VPQCSIWMQF WANAPYSPSL
ARLHRINRAR VRSHFVAELS QLVPADQVET ARQALQSYMD GVWLQAAQSE QPLDTEAART
AAHRVVDLVT SRALAA
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