| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1848 |
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| Symbol | |
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| ID | 4077873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1948766 |
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| End bp | 1949188 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638007164 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_613843 |
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| Protein GI | 99081689 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.149836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.418825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAGCCT TTCTGTCTTT TCGCTCCGTC GTTGATCCTG CCGATTGCGA TTTTCTCGGG
CATATGAACG TCTCACGCTA TTTCGCGGCC TGCTCTGATG GGGTGTTTGC CATACAGTCG
GAGATGGGTC TGACCGCCTC CGATATGCGC GAGGGGCGGC GGCTCTCGTT TGCCGTGGTG
AACGTGCAAA GCAACTTCCG GGCAGAGCTG GCGGCAGGGG ATGCGATCCG GCTGGAAACA
AGCATCATCG ATGTGGGAAC AAAATCGATG ACATTTCGCC ACCGTATGTT CCGCGCCGAT
GAAAATCTGC TCGCCTTTGA GACGGTCTTC AAATGCGTGA TGTTTGACCT TGAGGCGCGG
ATCTCCAGAG ACATCCCGGA CGAGGTGCGT GCCCGAGCGT CACAATTTCT CGAGGAGGCC
TGA
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| Protein sequence | MPAFLSFRSV VDPADCDFLG HMNVSRYFAA CSDGVFAIQS EMGLTASDMR EGRRLSFAVV
NVQSNFRAEL AAGDAIRLET SIIDVGTKSM TFRHRMFRAD ENLLAFETVF KCVMFDLEAR
ISRDIPDEVR ARASQFLEEA
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