| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1845 |
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| Symbol | |
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| ID | 4077870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1945917 |
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| End bp | 1946600 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007161 |
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| Product | ABC transporter related |
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| Protein accession | YP_613840 |
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| Protein GI | 99081686 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.141516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.653489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGG TGACGCTGAA AATCGAAGGC CTGAGGAAGA CCTATCTGGC TGGCACCCCT
GGTGAGGTTG CGGTTCTGCG CGGCGTGGAT CTGACCCTGC ATGCGGGCGA GGTTGTGGCG
CTGGTGGCGC CCTCGGGGGC GGGTAAATCG ACGCTTCTGC AGATTGCCGG GCTTCTGGAT
GTGGCCGACG CAGGCCGGGT GGAGATTGCC GGGCAGGACA TGGCGGGCGC GCGCGATCGC
AAACGCACGC GGGTGCGGCG GCAGGATGTG GGTTTTGTCT ATCAGTTCCA CCATCTGCTG
CCGGAGTTCT CGGCGCTGGA GAATATCGTG CTGCCGCAAC TCGCCAATGG CATCTCGCAG
CGGGACGCCG AAGCGCGCGG CGCCGAGCTC CTGGCGCTTG TGGGGCTCGA AACCCGCGCC
GCGCATCGCC CCGCGGCGCT TTCCGGCGGC GAGCAGCAAC GGGTGGCGTT CTGTCGCGCC
CTGGCCAATC GCCCGCGGCT GTTGCTCGCG GATGAGCCAA CCGGAAACCT GGACCCGGCG
ACGTCGGATC AAGTGTTCGA AGTGCTGATG CAATTGGTGT CCGAGACGGG TCTTTCGGCG
CTGATCGCCA CGCATAATCT TGAGCTGGCC GCAAGAATGG ACCGGGTGTT GCATCTTGAG
GACGGCGTTC TGGTCGAGCG CTGA
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| Protein sequence | MSEVTLKIEG LRKTYLAGTP GEVAVLRGVD LTLHAGEVVA LVAPSGAGKS TLLQIAGLLD
VADAGRVEIA GQDMAGARDR KRTRVRRQDV GFVYQFHHLL PEFSALENIV LPQLANGISQ
RDAEARGAEL LALVGLETRA AHRPAALSGG EQQRVAFCRA LANRPRLLLA DEPTGNLDPA
TSDQVFEVLM QLVSETGLSA LIATHNLELA ARMDRVLHLE DGVLVER
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