| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1832 |
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| Symbol | |
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| ID | 4076978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1929196 |
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| End bp | 1930872 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007147 |
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| Product | hypothetical protein |
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| Protein accession | YP_613827 |
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| Protein GI | 99081673 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4425] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.868946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAACA CTCGGATCGC GAGGATCACC GGCAAGGTCT CCATCCCCTG CGTCCTTTTG
GGGCTTTTGT GCTTTGCAGC CTCGCTGACC CCCTCCTTGA TCCCGCGCGG ACCAATGGCG
CAGGGCATCC TTGGGGGGCT GGTGATGGCC ATCGGCTATC TGATCGGTCA CATCGTTGGC
CTCCTGTGGC GCGCGGCCGA TCTCCCCCGG TTGCCCCGGC GGGCAGAAAG AGGCCTCACA
CAGGTGATCG CCATTGTGCT TGCGGGGGTC TTTCTCTGGG TGCTGGGGTC CAGCCTCAGA
TGGCAAAACG ACATTCGCGC AAAGATGGGC ATGGAAGAAG CAGACGCGCT TCAGCTTGCC
ACGATCCTCG TGATCGCGCT TGCGACGTTT ACACTCGCCT TTGCGCTCGG GCGTCTCGTC
GCCGCGCTGT TTCGCCTGAT CCGGTCGTGG TTTTATCGCA TCATGCCGCC TCGGCGCGCC
AATGTGCTGG GGGTCGTCGC AGTGGTGCTG ATCCTGTTTT TGGGCACGCG CGATGGCATT
ATCGACCGGC TCGTCACCGG GCTCGACGAA AGCTACGAGG CCGCTCAAGA GCTGTTCGAC
AAAGCCCCAC CACCCCCGGC TGCGCCACAC CTGACCGGCA GCGCCGCCTC GCTGGTAGAC
TGGGCATCCA TCGGCAAGCC GGGGCGCGAT TTCATCAGCT CCGGTCCAAC CGCCGAGGAC
ATCTCGGCCT TCACCGGCCA GCCCGCGCGC GACCCGATCC GGGTCTATGT CGGCCGCGCC
AGCGCAGAGA CGCCAGAGGC GCGCGCCGAA CTGGCGCTGG CCGAATTGAT CCGGCAGGAC
GCCTTTGCCC GCGACGTTCT GATCATGACA AGCCCCACCG GCACGGGCTG GATGGATCCC
GGATCCCACG ACCCTGTCGA ATACATGCAT GGTGGCAATA TCGCGACGGT GGCCGTGCAG
TATTCCTACC TGCAGTCGCC GCTCGCCCTG ATCCTCGAGA CACGCACGGG TCTTGAACAG
GCCACCGCGC TGCAGGATGC CGTGCACGGA TACTGGAAGA CTCTCCCCGC CGACGCACGC
CCCCGTCTCT ATGCCCACGG GCTGAGCCTT GGGGCCTGGT CCTCCATGCA TGCCACAAAC
ATGTTCCGGC TGCTCAACGA TCCGATCGAC GGCGCCTTCT GGGCCGGTCC CCCCTTTCCG
TCGACCTTTT GGAATTATGT CCAGAACCGG CGCAATCCGG GCACGCCCTG GGTGCTGCCG
GAAATCGGCG ACGGGTCGCT GGTCCGCTAT GCCTCACACA CGGCAGATGC GTCCGAGGCC
GCGGCAGAGT GGGGCGAGAT GCGCATCGTT TTCCTGCAGT ATTCCAGCGA TCCCGTTGTG
TTTTATGATC CGCGCTCGCT CTGGCGCGCA CCGCCATGGA TGCGGGATCC GCCCGCCGCA
GACATGACGG AACATTTCAT CTTCATGCCC GTCGTGACCC AGTTCCAGCT CGCGCTCGAC
ATCGCGCTGT CTTTTGGTGC CCCACCCGGC CACGGGCACG CCTATTATGC GCGCGACTAT
ATCGGACCGT GGTTGCAAGT CACCGCGCCG CGAGACTGGT CCCCCGAGGA CACCGCGCGC
CTGATCGCGC ATTGCAATAC CGGCTTCCAA CAAGGCTGCG CCAACGCCCG CCGCTAG
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| Protein sequence | MYNTRIARIT GKVSIPCVLL GLLCFAASLT PSLIPRGPMA QGILGGLVMA IGYLIGHIVG
LLWRAADLPR LPRRAERGLT QVIAIVLAGV FLWVLGSSLR WQNDIRAKMG MEEADALQLA
TILVIALATF TLAFALGRLV AALFRLIRSW FYRIMPPRRA NVLGVVAVVL ILFLGTRDGI
IDRLVTGLDE SYEAAQELFD KAPPPPAAPH LTGSAASLVD WASIGKPGRD FISSGPTAED
ISAFTGQPAR DPIRVYVGRA SAETPEARAE LALAELIRQD AFARDVLIMT SPTGTGWMDP
GSHDPVEYMH GGNIATVAVQ YSYLQSPLAL ILETRTGLEQ ATALQDAVHG YWKTLPADAR
PRLYAHGLSL GAWSSMHATN MFRLLNDPID GAFWAGPPFP STFWNYVQNR RNPGTPWVLP
EIGDGSLVRY ASHTADASEA AAEWGEMRIV FLQYSSDPVV FYDPRSLWRA PPWMRDPPAA
DMTEHFIFMP VVTQFQLALD IALSFGAPPG HGHAYYARDY IGPWLQVTAP RDWSPEDTAR
LIAHCNTGFQ QGCANARR
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