Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1818 |
Symbol | |
ID | 4076964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1912042 |
End bp | 1913139 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638007133 |
Product | hypothetical protein |
Protein accession | YP_613813 |
Protein GI | 99081659 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0390612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.325282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCGA AAGATGCCGA GGAAACCCAC CGTTTTCCGT GCGAGCAATG TGGCGCGGAC TATCGTTTTG CCCCGGCGGA GGGCGGGCTT GTCTGTGATC ATTGCGGCCA CAAGAAAGAG CTGATCGAAA GCCCATGGGG CGGTGGGGCG CTGAAGGAAC TCGACTTCCT GCAAGCGCTG CGTGAACAGC TTCCCGCTGC CGAAATGGAA GTCACGCGCG TCTCCTCCTG CCCCAACTGC GCCGCCCAGG TCGAATTCGA CCCGGCGGTG CATGCGCTGG AATGTCCCTT CTGCGCGACC CCCGTGGTGG CCGACACCGG CGAGAATCGC CACATCAAAC CCAAGGGCGT GCTGCCCTTT CAGTTTGACG AACGCGCCGC ACATCAGGCG ATGGAAGACT GGCTCGGCAA GCTGTGGTTC GCGCCCAACG GGCTAAAGGA ATACGCCCGC AAAGGGCGCA AGATGGATGG GATCTATGTC CCCTACTGGA CCTATGACGC CCAGACCCAC AGCCAATACA CCGGCCAGCG CGGCACCGAA TATACCGTAA GCCGTACCGT CATGGTGGAT GGCAAACCCC AGGTGCGCAG CGAAATCCGC GTGCGCTGGT CCAATGTGCG TGGACGGGTG CAGCGATTCT TTGACGATGT GCTGGTGCTC GCCTCCAAAA GCCTGCCGCG CAAATACACC GAAGGCCTCG AGCCCTGGGA CCTGTCGCAG CTTGCGCCTT ATCAGCCCAA GTATCTCGCA GGGTTTCGCG CGGAGGCCTA TACCATCGAC CTTGAAGCCG GCTTTGCCGA TGCGCGGCAA AAAATGGACC GCATCATCGA GCGTGACATC AAATTCGACA TTGGCGGCGA CCGCCAGCGG ATCAGTTCGG TCGATACGGA CGTCAGCGCG GTCACATTCA AACATGTGCT GCTGCCGGTG TGGATGGCCG CTTATAAATA TCGCGGGCAG AGCTATCGCT TTGTGGTCAA CGGGCAGTCG GGGCGCGTGC AGGGCGAACG CCCCTTTTCC GCCTGGAAGA TCGCAGGCGC GGTTGTCGTC GGCCTGATCC TGGCGGCAGG CGTGGCCTAC CTGGCGTCAC AGAGTTAA
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Protein sequence | MTPKDAEETH RFPCEQCGAD YRFAPAEGGL VCDHCGHKKE LIESPWGGGA LKELDFLQAL REQLPAAEME VTRVSSCPNC AAQVEFDPAV HALECPFCAT PVVADTGENR HIKPKGVLPF QFDERAAHQA MEDWLGKLWF APNGLKEYAR KGRKMDGIYV PYWTYDAQTH SQYTGQRGTE YTVSRTVMVD GKPQVRSEIR VRWSNVRGRV QRFFDDVLVL ASKSLPRKYT EGLEPWDLSQ LAPYQPKYLA GFRAEAYTID LEAGFADARQ KMDRIIERDI KFDIGGDRQR ISSVDTDVSA VTFKHVLLPV WMAAYKYRGQ SYRFVVNGQS GRVQGERPFS AWKIAGAVVV GLILAAGVAY LASQS
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