| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1801 |
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| Symbol | |
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| ID | 4076947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1892504 |
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| End bp | 1893631 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007116 |
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| Product | ABC transporter related |
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| Protein accession | YP_613796 |
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| Protein GI | 99081642 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00733059 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0241111 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAGC AGAGGACCAA ATCCGCGCTG CCCTCCGTAC AAGCGGAAGG GCACGAGGTG
ACGCCCCGGC TGGAAATCCG CAATATCCGC AGGTTCTTTG AGGGCCGCGC GGTGGTGGAT
GATGTCTCGC TGACCGTGCT GCCGGGGCAG GTGACCTGCC TTCTGGGGCC TTCGGGCTGT
GGCAAGTCCA CCACCCTGCG CATGATCGCA GGCGTGGAAA TGCAGGACGA GGGCGAAATC
TACGTCGATG GCAAGCTGAT CTGCGACACC ATTTTTCGCG TCCCGCCCGA GCGGCGCGAG
ATTGGTCTGA TGTTTCAGGA CTTTGCCCTG TTTCCGCATC TGAGCGTTGG CGATAATGTG
GCCTTTGGCC TGAAGGGCAG CAAGGACCAG AAACGCGCCC GCGCCCGCGA GCTTTTGGAC
CGGGTGTCGC TGGCGCAATA CATAGATGAC TATCCACATC AGCTCTCGGG CGGGGAACAG
CAGAGGGTGG CGCTGGCGCG CGCGCTCGCG CCGAGCCCCA AGATCATGCT GATGGATGAG
CCGTTTTCGG GGCTGGACAA TCGCCTGCGC GATGGCATCC GAGACGAGAC TTTGAGCCTT
CTGAAAGAAG AAGACACTGC CGTTCTGCTT GTCACCCACG AACCCGAAGA AGCGATGCGC
ATGGCCGATG AGATTGCGCT CATGCGCGAC GGGCGTATCG TGCAGCAGGG CGCGCCCTAC
AATGTCTACA CCCGTCCTGT CGACAAGGCT GCGGTGGCGT TTTTCTCGGA TGTGAACACG
CTGCCAGCAC AGGTCAATGG CGCGCTTGCC GAGACCCCCT TTGGCCAGTT CCTCGCGCCC
GGCGTGCCGG ATGGCACAGA TGTGGAAATC GTATTCCGCC CGCAGCATCT GCGCATCGAT
TTTGACCGCA ATGGTCGAGG CCCGGAAGCC ACGGCCCGCG ATGGTGTGCC CGCACGCGGC
ATCGTGCAGC GTGCGCGATT CCTCGGCAAT GAGAGCCTTG TGGAATTCCG AATGGACTTC
GACGGCTCGA TCCTCAAGGC CACGGTGCCC AATGTGTTCT TGCCCGCCGA GGGGCGCGCA
ATGTGGCTGA CGGTGCCGCG CGACCGGTGT TTTGTCTTCA CACGGTGA
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| Protein sequence | MPEQRTKSAL PSVQAEGHEV TPRLEIRNIR RFFEGRAVVD DVSLTVLPGQ VTCLLGPSGC
GKSTTLRMIA GVEMQDEGEI YVDGKLICDT IFRVPPERRE IGLMFQDFAL FPHLSVGDNV
AFGLKGSKDQ KRARARELLD RVSLAQYIDD YPHQLSGGEQ QRVALARALA PSPKIMLMDE
PFSGLDNRLR DGIRDETLSL LKEEDTAVLL VTHEPEEAMR MADEIALMRD GRIVQQGAPY
NVYTRPVDKA AVAFFSDVNT LPAQVNGALA ETPFGQFLAP GVPDGTDVEI VFRPQHLRID
FDRNGRGPEA TARDGVPARG IVQRARFLGN ESLVEFRMDF DGSILKATVP NVFLPAEGRA
MWLTVPRDRC FVFTR
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