| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1795 |
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| Symbol | |
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| ID | 4076824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1888716 |
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| End bp | 1889606 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007110 |
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| Product | Sec-independent protein translocase TatC |
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| Protein accession | YP_613790 |
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| Protein GI | 99081636 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0386851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.066575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCAAA CAGACGATCT TGACGATTCC ACAGCGCCGC TGATCGAGCA TCTGGCCGAA
TTGCGCAGCC GCCTGATCCG GGCGGTCATG GCCTTTGCGG TGGGGATCGT GCTGGCCTTT
ATGGTAGCCG AACCGATCCT GCAGTTCCTC GTCGCTCCGA TCGAGCAGAC CCTACGAGAA
TTGGGCGATC CCTCCCCGAC GCTGCAGTAT ACCTCGCCGC AGGAGTATCT CTTTACCCTT
TTCCGGATCT CGATGGTGTT TGGATTTGCG CTGTCGTTCC CGGTGATCGG CTTTCAGCTC
TGGCGGTTTG TGGCGCCGGG CCTCTACAAG AGCGAGAAAG GCGCGTTTCT GCCGTTCCTG
ATTGCCTCGC CCTTCATGTT CCTGCTTGGC GCGTCCTTTG CGCAATTTGT GGTGACGCCA
CTGGCAATGC AGTTCTTCCT CGGCTTTGCT GACGTGAGCT CGATCTTTGC GGGCCTGTTG
TCGCAAGCCA CCGGAGGCGA CGTGCCTGCG GATGTTGCCG TGGTGCCGGA GACATCCGAA
GGGGTGAAGA TCACCTTCTT TGGCAAAGTG AACGAGAGCC TTGATATTAC GCTCAAATTC
ATCATGGCCT TTGGTCTGTG CTTCCAGCTG CCGGTTCTTC TCACCCTGAT GGGCAAGGCC
GGATTGGTGA GCGCCGAAGG GCTGGGTGGC ATGCGCAAAT ATGCGGTTGT GGCCATTCTG
GTGCTGGCCG CGTTGGTGAC GCCGCCGGAT GTGATCACCC AGATCATTCT CTTTACGGTG
GTCTACGGGC TTTATGAGGT ATCGATCTTC CTCGTCGGGC GCGTCGAGAA AAAGCGCGAG
GCGCAGCTGC GCGCCGAAGG CTACTATGAC GACGAGCTGG ACGGCGAATA A
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| Protein sequence | MSQTDDLDDS TAPLIEHLAE LRSRLIRAVM AFAVGIVLAF MVAEPILQFL VAPIEQTLRE
LGDPSPTLQY TSPQEYLFTL FRISMVFGFA LSFPVIGFQL WRFVAPGLYK SEKGAFLPFL
IASPFMFLLG ASFAQFVVTP LAMQFFLGFA DVSSIFAGLL SQATGGDVPA DVAVVPETSE
GVKITFFGKV NESLDITLKF IMAFGLCFQL PVLLTLMGKA GLVSAEGLGG MRKYAVVAIL
VLAALVTPPD VITQIILFTV VYGLYEVSIF LVGRVEKKRE AQLRAEGYYD DELDGE
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