| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1793 |
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| Symbol | |
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| ID | 4076822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1886267 |
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| End bp | 1887547 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638007108 |
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| Product | peptidase M23B |
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| Protein accession | YP_613788 |
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| Protein GI | 99081634 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.532041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0360441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA CGCCGAAGGT CTTCCGCACG ATCCGCCCGA TCCCGCTGCC TTTTCCCCGG
TCCTCGTCCG CATCGAGTGG CGCATCGCGC CTTCGACCTT CGATTGCCCT ACTGCCGCTG
GTGCTGCTGG CAGCCGCCTG TACCGAGCCG CTCGATTATG ATCTGCGGGG CCAGCTTGGC
GCCTTCAACA CCACAAGGGC CGCGCAGACC GCCACCGAAA ACCGCCCAGC GCCCGACAGC
CGGGGGCTGA TCACCTACCC GTCCTATCAG GTTGCAGTCG CGCGCAATGG CGACACGGTT
GCGGATCTCG CCGGGCGCGT CGGGCTGCCC GCGGTCGAGG TCGCGCGTTT CAACGGCGTG
GAGACCACCG ACCCCCTGCG CAAAGGTGAG GTGCTCGTCC TGCCCCGCCG CGCGCCCGAG
GCCTCTGCGC GCAGTGGCAC CGCCACGCCT GGCGGCGTGG ATATCGCCTC GCTTGCAGGC
AGCGCCATTG ACAGCGCCCC CTCGACCTCG CCCAATCCGG GCTCCGTGAC CACCACCACG
CTGCAGAACA CCCCCAGCAA ACCCGCACCC ACGCGCGTGC AGGCGGGCCC AGAACCCGTG
CGCCACAAGG TGACGCGTGG CGAGACCGCC TATACGATCG CGCGGCTCTA CCAGATCCCG
GTCAAGGCAC TGGCGGAATG GAACGGGCTT GGAAGCGATT TTGCGATCCG CGAAGGCCAG
TACCTGCTGA TCCCGCTCAA AGATCCCAAT GCCCGGCCGC CAAAGGCAGA GACGCAAGAG
GCCGTGACCG CCCCAGGTCA GGGCAGTGCG ACCCCGACCC CGCCCAGCGC CACGCAGCCC
TTGCCGGATG AGGATGTCAA ACCCGCCGCA GAGGCCCGCA CAGAGCCCAC GCCCACGGTC
AAAATCCAAG AGCCCACCCG CGCATCAGAG GCCGCGATGG CCTATCCGGT GACCGGCAAG
ATCATTCGCG CCTACTCCAA GGGCAAGAAC GACGGCATCG ACATCGCCGC CGCCCCCGGC
AGCCCCGTGA AGGCCGCAGA GGCCGGCACC GTCGCCGCGA TCACCGCGGA CTCCAACAAG
GTGCCGATCA TCGTGATCCG TCACGACCGC AATCTTCTGT CGGTCTATGC CAATGTCGAT
GGGATCCGGG TTCAAAAGGG CGATCGGGTC AACCGCGGCC AGAACATCGC CAAGCTGCGC
GGCAGCGCCG AAGAGGCCTA TGTCCACTTT GAAGTGCGCG ACGGCTTTGA GAGCGTCGAC
CCTCTGCCCT ATCTGCAATA A
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| Protein sequence | MTRTPKVFRT IRPIPLPFPR SSSASSGASR LRPSIALLPL VLLAAACTEP LDYDLRGQLG
AFNTTRAAQT ATENRPAPDS RGLITYPSYQ VAVARNGDTV ADLAGRVGLP AVEVARFNGV
ETTDPLRKGE VLVLPRRAPE ASARSGTATP GGVDIASLAG SAIDSAPSTS PNPGSVTTTT
LQNTPSKPAP TRVQAGPEPV RHKVTRGETA YTIARLYQIP VKALAEWNGL GSDFAIREGQ
YLLIPLKDPN ARPPKAETQE AVTAPGQGSA TPTPPSATQP LPDEDVKPAA EARTEPTPTV
KIQEPTRASE AAMAYPVTGK IIRAYSKGKN DGIDIAAAPG SPVKAAEAGT VAAITADSNK
VPIIVIRHDR NLLSVYANVD GIRVQKGDRV NRGQNIAKLR GSAEEAYVHF EVRDGFESVD
PLPYLQ
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