| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1787 |
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| Symbol | |
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| ID | 4076816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1880937 |
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| End bp | 1882457 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007102 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_613782 |
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| Protein GI | 99081628 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0653231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGTA TCTTGGGCAT CGCAAGCAGA AACGAACAAG TGTTTGCGGA ACTCTATGAC
GGGCTGCTGA TGCTGCAGCA TCGCGGTCAG GATGCGTCAG GCATCGTCAC CTACGGCGAT
GGGTTCTTTC GCGAACGCAA GGCCAACGGT CTGGTGAAGG ACGTCTTTGG TGCCAAAGAC
GCCGAGACCC TGCAAGGCCG TGTCGGGATG GGCCATGTGC GCTACCCCAC CGCAGGTTCG
CTCTCGGCCG CCGAGGCGCA GCCGTTTTTT GTGAACGCAC CCTATGGGAT CTACCTGGTC
CACAACGGCA ATATCACCAA CACCGAAGAG CAGCGCGCAA AGGTCACCGG CAAATACAGC
CGCCACCTGC GCACCACCTC GGATTCCGAG ATCCTGCTCA ACGTGCTGGC GGATAAGGTG
GCTGACGCGA TCAAGGTCAA TGGCAACGCG GATCCGATCC GCAACATCTT TGCCGGTGTG
AAAATGACCA TGGAGCGCGT CCAGGGCGCC TATTCCGTGA TCTGCCTCAT CGCCGGCGTC
GGCATGCTGG CCTTCCGCGA CCCCCATGGC ATCCGCCCGC TCTCCGTGGC CCAACGCGAA
GCCGAGGGTG AGGGCAATGA TTATGCCTTT GCCTCCGAGG ATGTGGCTTT TGGCATCAAC
GGCTTTGAAA AACTGCGGGA CCTCAAACCC GGCGAGGCCA TCCTCGTCGA TCTTGACGGC
AACAAGCACG AGTTCCAGGC GGTCGAAGGC AAGCTCACCC CTTGTATCTT CGAATATGTC
TACCTCGCCC GCCCCGACAG CCTCTTGGAC GGGATCTCGG TATATAAAAC CCAGATCCGC
ATGGGGCAGA CACTCGCCAA GCAGATTGAG GCATCCGGCC TCGACATCGA CGCCATCATC
CCGGTGCCAG ACAGCGCCCG CCCCGTGGCA CTTGAGGTTT CCAACATCAC CGGCATTCGC
TACCGCGAGG CGCTGGTGAA AAACCGCTAT GTGGGCCGAA CATTCATCAT GCCCGGGCAA
GAAGAACGCC AGAAATCCGT GCGCCGCAAA TTGAACGCGA TCCCGCGCGA GATGCAGGAC
CGCAACATCC TGCTCATTGA TGACTCCATC GTGCGGGGCA ATACGATCAA GAAGATCGTG
CAGATGTGTC GCGAGGCCGG TGCCAAGAAG GTCTATATCG CCTCCGCTTC GCCGCCGGTG
AAATACCCCA ATGTCTATGG CATCGACATG CCCACCAAAC ACGAACTGGT GGCCAACGGG
CGCTCGATCG AGGAGATTCG CGAGGAGTTG GGGGCGGATG AGCTGTTCTA CCAGAACCTC
GAGGACCTGA TCTGGGCCGC CAAAGGTGGA AACCCGGACA TCGAAGCCTT TGATTGTTCG
TGTTTTGACG GCGAGTATGT CACCGGCTCG GTCAGCGAGG ACTACCTCAA CACGCTCGAA
ACCAGCACCC GCGTGACCAA GAAAATCAAG GACATGCCTG ATGCAGGCGC ATCCTGGAAC
GGCGCAACGC TGGCCACCTG A
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| Protein sequence | MCGILGIASR NEQVFAELYD GLLMLQHRGQ DASGIVTYGD GFFRERKANG LVKDVFGAKD
AETLQGRVGM GHVRYPTAGS LSAAEAQPFF VNAPYGIYLV HNGNITNTEE QRAKVTGKYS
RHLRTTSDSE ILLNVLADKV ADAIKVNGNA DPIRNIFAGV KMTMERVQGA YSVICLIAGV
GMLAFRDPHG IRPLSVAQRE AEGEGNDYAF ASEDVAFGIN GFEKLRDLKP GEAILVDLDG
NKHEFQAVEG KLTPCIFEYV YLARPDSLLD GISVYKTQIR MGQTLAKQIE ASGLDIDAII
PVPDSARPVA LEVSNITGIR YREALVKNRY VGRTFIMPGQ EERQKSVRRK LNAIPREMQD
RNILLIDDSI VRGNTIKKIV QMCREAGAKK VYIASASPPV KYPNVYGIDM PTKHELVANG
RSIEEIREEL GADELFYQNL EDLIWAAKGG NPDIEAFDCS CFDGEYVTGS VSEDYLNTLE
TSTRVTKKIK DMPDAGASWN GATLAT
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