| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1748 |
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| Symbol | |
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| ID | 4075812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1841365 |
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| End bp | 1842276 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007062 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_613743 |
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| Protein GI | 99081589 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.056741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTAT GCATGAACTG GAGTGCAATC AACTTTGACT GGAACCAGGT GAGATCCTTT
CTGGCGACTG CCGAGGAAGG CTCGTTCTCG GCTGCCGCGC GCGTGCTGAA CCAGACGCAG
CCGACCGTGG GCCGTCAGGT TGGCGCACTC GAGGAGGCGC TTGGGGTCAC CGTGTTTGAG
CGTGTCGGCA AGTCGCTCCG ACTTACGACG GCGGGTACGG AGCTATTGGT CCATGTCCGG
GAGATGGCGG ATGTCGCGAA CAAGATTTCG CTGACTGCAA CCGGCCAGTC GCAATCTGTC
GAAGGGCAGG TCAGGATCAC CGCGTCCGAT GTGATGTCGA CCTATCAACT GCCTGCCATG
CTCAAACAGA TCAGGCTTGC GGCGCCCCGG CTCGAAATCG ACGTGGTTGC CGCCAATGAT
CTCCGGGACC TTCACCGGCG CGAGGCCGAC ATCGCGATCC GGCACATCCG CCCGACGCAG
CCGGATTTGA TCGCGCGGCT TGTGGCGCAG GCGAGCGCGC ATCTCTATGC GGCTTCCTCC
TATCTGGATC AGGTCGGACG GCCCAGAAGC GAGGAAGAGC TGGCTCAGTT GGACTTTGTC
AGCTTTGGCG ATGTCGAGAG GTTCATCGGG TTTCTCAATC CGGCGGGCAT TCCGGTAACG
CGCAAAAATT TCCGTATCGG ATCGCACAGC GGGGTCGTGT CATGGGAACT GGTGCGCCAA
GGCTTTGGCG TTAGTGTCAT GTCAGATGAT GTAGCAGCCC CAACCCCCGG AATTGAGAGA
ATTTTGCCGG ACCGAGATCC TTTTGCGTTT CCGATTTGGC TGGCAACCCA TTCAGAGCTG
CACACCGCAC GTCGGATCAG GCTGGTTTTT GACCAATTGG CCGAGCAATT TAAGGCGAGA
GAAACCTCTT AA
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| Protein sequence | MHLCMNWSAI NFDWNQVRSF LATAEEGSFS AAARVLNQTQ PTVGRQVGAL EEALGVTVFE
RVGKSLRLTT AGTELLVHVR EMADVANKIS LTATGQSQSV EGQVRITASD VMSTYQLPAM
LKQIRLAAPR LEIDVVAAND LRDLHRREAD IAIRHIRPTQ PDLIARLVAQ ASAHLYAASS
YLDQVGRPRS EEELAQLDFV SFGDVERFIG FLNPAGIPVT RKNFRIGSHS GVVSWELVRQ
GFGVSVMSDD VAAPTPGIER ILPDRDPFAF PIWLATHSEL HTARRIRLVF DQLAEQFKAR
ETS
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