Gene TM1040_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1710 
Symbol 
ID4078286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1808313 
End bp1809083 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content65% 
IMG OID638007024 
Producthypothetical protein 
Protein accessionYP_613705 
Protein GI99081551 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCT CTTTGCCGAT GTATGATCGC CCCGAAACCG CTGCTGCAAA TGATGCCTTC 
TGGGCCGCGA TCCGCGCCGA ACTCGGCCAC GGGCCTGAGA GCCTGACACG CGACATGGAT
CTGTGGCAGG TCTGGCGCGC GCCCGATCTG TTGCTGGCGC AGACCTGTGG ACTGCCGTAT
CGCGCGCGCC TCTACGGCGA TGTGGAACTG GTGGGCACCC CCGATTACGG CCTGCCGGGC
TGTCCGGAGG GGCATTACAA CAGCGTCTTG ATCGCCGCAG CCGATCGCAA GGGAACGCCC
CTTCGGGATT TTGCCGGGAC CCGCTTTGCC TACAATGACT CTCTGTCGCA GTCCGGCTGG
GCGGCGGCCA TGATGCGGAT GCGTGCAGAC GATATGCTTC CCGGCGAGCT GATCGAAACC
GGCAGCCACC AGGCTTCGGC AGTCGCGGTT GCCGAAGGGC GTGCGGATTT TGCCAGTCTT
GATGCGCTCA CCTATCAGAT GCTGCTGGAC TACGAGCCGG ACCTGATGGC AGGCCTGTGC
GAACTGGAAC GCACCGAGCC GACACCGGCG CTGCCGTTCA TCACTGCGCT GACACAGGAT
GCCACCATCC TGCGCACCGC GATGGAGCGC GCGCTCGAGG CGCTGGAGCC TGAACATCGC
GAGACTCTGC ACCTGAAGAA GATCGTCTCG ACCACCCCGA GCGACTACCT TGCAGTGCCC
ACCCCACCGG GTCCGACACT GGTGATGGAC CGTCTTGCCC GCGCGCGCTG A
 
Protein sequence
MIASLPMYDR PETAAANDAF WAAIRAELGH GPESLTRDMD LWQVWRAPDL LLAQTCGLPY 
RARLYGDVEL VGTPDYGLPG CPEGHYNSVL IAAADRKGTP LRDFAGTRFA YNDSLSQSGW
AAAMMRMRAD DMLPGELIET GSHQASAVAV AEGRADFASL DALTYQMLLD YEPDLMAGLC
ELERTEPTPA LPFITALTQD ATILRTAMER ALEALEPEHR ETLHLKKIVS TTPSDYLAVP
TPPGPTLVMD RLARAR