Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1710 |
Symbol | |
ID | 4078286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1808313 |
End bp | 1809083 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638007024 |
Product | hypothetical protein |
Protein accession | YP_613705 |
Protein GI | 99081551 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCCT CTTTGCCGAT GTATGATCGC CCCGAAACCG CTGCTGCAAA TGATGCCTTC TGGGCCGCGA TCCGCGCCGA ACTCGGCCAC GGGCCTGAGA GCCTGACACG CGACATGGAT CTGTGGCAGG TCTGGCGCGC GCCCGATCTG TTGCTGGCGC AGACCTGTGG ACTGCCGTAT CGCGCGCGCC TCTACGGCGA TGTGGAACTG GTGGGCACCC CCGATTACGG CCTGCCGGGC TGTCCGGAGG GGCATTACAA CAGCGTCTTG ATCGCCGCAG CCGATCGCAA GGGAACGCCC CTTCGGGATT TTGCCGGGAC CCGCTTTGCC TACAATGACT CTCTGTCGCA GTCCGGCTGG GCGGCGGCCA TGATGCGGAT GCGTGCAGAC GATATGCTTC CCGGCGAGCT GATCGAAACC GGCAGCCACC AGGCTTCGGC AGTCGCGGTT GCCGAAGGGC GTGCGGATTT TGCCAGTCTT GATGCGCTCA CCTATCAGAT GCTGCTGGAC TACGAGCCGG ACCTGATGGC AGGCCTGTGC GAACTGGAAC GCACCGAGCC GACACCGGCG CTGCCGTTCA TCACTGCGCT GACACAGGAT GCCACCATCC TGCGCACCGC GATGGAGCGC GCGCTCGAGG CGCTGGAGCC TGAACATCGC GAGACTCTGC ACCTGAAGAA GATCGTCTCG ACCACCCCGA GCGACTACCT TGCAGTGCCC ACCCCACCGG GTCCGACACT GGTGATGGAC CGTCTTGCCC GCGCGCGCTG A
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Protein sequence | MIASLPMYDR PETAAANDAF WAAIRAELGH GPESLTRDMD LWQVWRAPDL LLAQTCGLPY RARLYGDVEL VGTPDYGLPG CPEGHYNSVL IAAADRKGTP LRDFAGTRFA YNDSLSQSGW AAAMMRMRAD DMLPGELIET GSHQASAVAV AEGRADFASL DALTYQMLLD YEPDLMAGLC ELERTEPTPA LPFITALTQD ATILRTAMER ALEALEPEHR ETLHLKKIVS TTPSDYLAVP TPPGPTLVMD RLARAR
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