| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1701 |
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| Symbol | |
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| ID | 4078277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1797423 |
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| End bp | 1797905 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007015 |
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| Product | phenylacetic acid degradation-related protein |
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| Protein accession | YP_613696 |
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| Protein GI | 99081542 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0708243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.927888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTCG CGGAAACACC TTCTGATCTG TTGCCGATCG AAAAGGTCGC CCAGATCTCC
GGTCTCGACT TCATGACGGC CATCCTTGAA GGCCGCCTGC CCGGCCCGCC GATCGGGGAA
ACCCTCGGCT TTAGCCTCAA GAGTGTGGAG CCCGGGCGCG TGGTGTTTCG CGGCGCACCT
GAATTCAATG TCACCAACCC GATGGGCACG GTGCATGGGG GTTGGTACGG CACGCTTCTT
GACAGCGCCA TGGCCTGCGC GGTGATGACA CGGGTGCCCA AGGGATCCGT CTACACAACG
CTGGAATTCA AGATCAACAT TCTGCGCTCG ATCCCGCTTG GCATGTCCAT CGACTGCTGG
GGGGAAATCG ACCACGTCGG GCGCACGACC GGGATCGCAC ATGGCGAAAT CCGTGGTGTC
GAAGATGGCA AGCTCTATGC AACAGGATCA ACCACCTGCA TCGTGATGAA AGTCGCGCCC
TGA
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| Protein sequence | MAVAETPSDL LPIEKVAQIS GLDFMTAILE GRLPGPPIGE TLGFSLKSVE PGRVVFRGAP
EFNVTNPMGT VHGGWYGTLL DSAMACAVMT RVPKGSVYTT LEFKINILRS IPLGMSIDCW
GEIDHVGRTT GIAHGEIRGV EDGKLYATGS TTCIVMKVAP
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