| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1691 |
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| Symbol | |
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| ID | 4078267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1784602 |
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| End bp | 1786695 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007004 |
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| Product | C-5 cytosine-specific DNA methylase |
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| Protein accession | YP_613686 |
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| Protein GI | 99081532 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0270] Site-specific DNA methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC AGCTTCCCCT TGAATTCCTT GACGCAGCGC GGGTTTACGA GCGCCCCTTG
ATTGTCGACA GCTTTGCGGG CGGCGGCGGG GCCAGCACTG GCATTGAGCT CGCTCTCGAC
CGTAGTCCGG ATATCGCGAT CAATCATGAT CCGGCAGCGC TTGCGCTACA TGAAGCGAAC
CACCCCGAGG CGTTACACCT TTCGGAGAAC GTATATCGCA TTGACCCGCT TGAGCATTTG
AGTGGAAAGC ACATCGGCCT GATGTGGTTC AGCCCCGATT GCAAGCACTT CTCCAAGGCC
AAGGGCGGTA AGCCGGTAGC TCGCAACATC CGCGATCTCG CTTGGATTAT TCCGGGCTGG
ATCGAAAGGA TTCAGAAGAG CGGCGGCAAG GTCGACGTAG TTCTTATGGA GAATGTCGAG
GAGTTCGCTG GCTGGGGGCC ACTGATCGAG ACCGACAAAG GCCTGATGCC GTGCCCAGAG
CGCAAGGGGG AAACGTTCGA AGCGTGGTGC AAAAAGATCC GCAGCCTTGG TGGCAAGCTA
GAGCGAAGAG AACTCCGAGG CTGTGACTAC GGAGCGCCAA CAATTCGCAA GCGCCTATTT
GTGGCGATCC GCTTTGATGG GGAGCCTGTC AGTTGGCCCA CGCCCACACA CGGCGATCCC
AACAGCGCCG AGGTGAAGTC GGGCAAGCTC AAACCGTGGC GAACCGCAGC AGAATGTATC
GACTGGAGTC ACCCTTGCCC CTCGATTTTC GACAGCAAGG CCGAGATCAT GGAAAAATAC
GGACTGCGCT CGGTGCGCCC TCTGGCCCAC AACACGCTTG CGCGCGTGGC TCGTGGCCTG
CATCGCTATG TTCTGCAGGC TGAGCGTCCG TTTCTGGTGA ACCTGACCCA CGGCGGGCGC
GTCGAGGACG TCGCAGAACC CTTCAAGACA ATCACGGGGG CCAACCGGGG CGAAAAGGCG
ATTGTTGCGC CCTCCCTTGT CAGCGTCGCG CATGGCGATA GCGGCGGTCG TCGAAAATAC
CCACTGACCG ATCCATATGG CGTTGTAACG GCCGGAGGCG TTTCAAACGC ACTCATTGCC
CCCAGCATTG CACGTTTCAC CACTGGCGGA ACCGGACACC AAATCAAATC TCCCCTCGCA
ACGGTCCCGG CAAACAGCTT CATCAAGCGC CCAGGTGGTG CCGCCCCGCT TGGAGTGCTG
GCACCGTACC TTGCCACCAT GCGCAACAGC CTGAAGCCTT GGCAGGAGGT AACGAAGCCC
ACCCACACCG TCACGGCGGG CGGCGCAGGC CTTACGCTTT GCGCGCCCCA CCTGATGAGC
CTGAAAGGCA CTGCGCGCCG GGATCGTGCT GCAGACGCAC CTCATCCGAC CGTTCTGGCC
GGAGGCGGCC ACTCCGCTCT CATGGCCCCC GTCTTGACCT ACGCACAACA GGGCGGAGCC
AATCGCTCTA TGCTGGACCC GCATCATACG ATCTGCGCGA GCAAAAAGGA CCAGAACAGC
CTGTTCTCGG CCTTTCTCGC CCAGCAAAAC GGCGGACCGC GCATGGCGGG GCACAGTGGC
CATGATCCCC GCGAGCCGAT TTCCACCGTC ACCGGCAGCG GGAGCCAGCA GACGCCGGTG
GCCGCGTTCT TCGCCAAATA TTACGGCACC GGTGATGGAG CGCGCGCGGA CGCTCCGCTG
CACACTATCA CAGTCAAGGA TCGCATGGCG CATTGCCAAG CGGATGTGAT CCCAGCTCCA
CCGTTCACTG ACGCCCATAC GGAGCGCGCC CGCCAAGTCG CAAGCCTGAT GCGCGACCAT
GGCCTTTGGG ATGAACGCGA GTTCGTCACA CTCGAGATCG AGGGGCAAGC TTTCATCATC
GTAGATGTCG GTATGCGCAT GCTCACCCCG CGAGAGCTCT TCAACGCCCA AGGCTTCCCT
GCAGACTACG TGATCGAGGG AATTTGGAAG CAGGAAAGCG ATGACTGGAC CTTTTCCACG
TTCCCCAAGG ACGTGCAGGT CCGGTGCGTG GGCAATAGCG TCTGCCCACC AGTGGCCGAG
GCGCTGGTGC GCGCCAACTG TTCGCACCTT ATCGAGATGG AGGACTCGCA GTGA
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| Protein sequence | MTAQLPLEFL DAARVYERPL IVDSFAGGGG ASTGIELALD RSPDIAINHD PAALALHEAN
HPEALHLSEN VYRIDPLEHL SGKHIGLMWF SPDCKHFSKA KGGKPVARNI RDLAWIIPGW
IERIQKSGGK VDVVLMENVE EFAGWGPLIE TDKGLMPCPE RKGETFEAWC KKIRSLGGKL
ERRELRGCDY GAPTIRKRLF VAIRFDGEPV SWPTPTHGDP NSAEVKSGKL KPWRTAAECI
DWSHPCPSIF DSKAEIMEKY GLRSVRPLAH NTLARVARGL HRYVLQAERP FLVNLTHGGR
VEDVAEPFKT ITGANRGEKA IVAPSLVSVA HGDSGGRRKY PLTDPYGVVT AGGVSNALIA
PSIARFTTGG TGHQIKSPLA TVPANSFIKR PGGAAPLGVL APYLATMRNS LKPWQEVTKP
THTVTAGGAG LTLCAPHLMS LKGTARRDRA ADAPHPTVLA GGGHSALMAP VLTYAQQGGA
NRSMLDPHHT ICASKKDQNS LFSAFLAQQN GGPRMAGHSG HDPREPISTV TGSGSQQTPV
AAFFAKYYGT GDGARADAPL HTITVKDRMA HCQADVIPAP PFTDAHTERA RQVASLMRDH
GLWDEREFVT LEIEGQAFII VDVGMRMLTP RELFNAQGFP ADYVIEGIWK QESDDWTFST
FPKDVQVRCV GNSVCPPVAE ALVRANCSHL IEMEDSQ
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