Gene TM1040_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1684 
Symbol 
ID4078260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1780207 
End bp1780608 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content54% 
IMG OID638006997 
Producthypothetical protein 
Protein accessionYP_613679 
Protein GI99081525 
COG category[S] Function unknown 
COG ID[COG1598] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.690218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAT ACCCCATCGT GATCGCACCG CTGCCCGATG AAGATGGCGG CGGATACATT 
GCACTTTATC CGGACCTTCC GGGATGCATG TCCGACGGAG ACACTCCAGA AGAAGCGCTC
GTGAACGCCA AGGACGCCTT TGATGCTTGG ATCGAAGTTC AGAAAGAGCG CGGCGCGTCA
ATCCCAGCAC CTGGGGATTC CTCATCCGAA AATGCGAAGC GGATGGATTC ACTCATGGAA
GCATTGAAGG TTGCGCTGGA CCGAGTCGAG CTGGCAGACC AGCACATCAA ATCGCTTGAG
GCTGCTTTGG AGAAAGCAAT TCGGCAAAAT ACGGGATCTT GGCAGCCTTC CGGCATGCTT
GCCCACACAA CCCCAGCAGA CAACATCTCT CACATTCACT AA
 
Protein sequence
MSEYPIVIAP LPDEDGGGYI ALYPDLPGCM SDGDTPEEAL VNAKDAFDAW IEVQKERGAS 
IPAPGDSSSE NAKRMDSLME ALKVALDRVE LADQHIKSLE AALEKAIRQN TGSWQPSGML
AHTTPADNIS HIH