Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1684 |
Symbol | |
ID | 4078260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1780207 |
End bp | 1780608 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638006997 |
Product | hypothetical protein |
Protein accession | YP_613679 |
Protein GI | 99081525 |
COG category | [S] Function unknown |
COG ID | [COG1598] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.690218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAT ACCCCATCGT GATCGCACCG CTGCCCGATG AAGATGGCGG CGGATACATT GCACTTTATC CGGACCTTCC GGGATGCATG TCCGACGGAG ACACTCCAGA AGAAGCGCTC GTGAACGCCA AGGACGCCTT TGATGCTTGG ATCGAAGTTC AGAAAGAGCG CGGCGCGTCA ATCCCAGCAC CTGGGGATTC CTCATCCGAA AATGCGAAGC GGATGGATTC ACTCATGGAA GCATTGAAGG TTGCGCTGGA CCGAGTCGAG CTGGCAGACC AGCACATCAA ATCGCTTGAG GCTGCTTTGG AGAAAGCAAT TCGGCAAAAT ACGGGATCTT GGCAGCCTTC CGGCATGCTT GCCCACACAA CCCCAGCAGA CAACATCTCT CACATTCACT AA
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Protein sequence | MSEYPIVIAP LPDEDGGGYI ALYPDLPGCM SDGDTPEEAL VNAKDAFDAW IEVQKERGAS IPAPGDSSSE NAKRMDSLME ALKVALDRVE LADQHIKSLE AALEKAIRQN TGSWQPSGML AHTTPADNIS HIH
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