Gene TM1040_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1667 
Symbol 
ID4075770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1766958 
End bp1767530 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content67% 
IMG OID638006980 
ProductphiE125 gp8 hypothetical protein 
Protein accessionYP_613662 
Protein GI99081508 
COG category 
COG ID 
TIGRFAM ID[TIGR02215] phage conserved hypothetical protein, phiE125 gp8 family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.805705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTTCC GCCCCATTCT CACCGCGCCC CCGGCCGAAA GCCCCGTCAC GCTGGACGAG 
GTGAAGGCAC AGGCAACCGT CGATTTCGCC GACGATGATG CCCTTCTGAC CGGCCTGCGG
GACGCGGCTG TTGCGTATCT TGACGGCTTC CGCGGCGTTC TGGGGCGGGC CATGGTCACG
CAGACGTGGC AGGTGCAGCG TGCGTCCTGG GCGCGCGAAA TGTGCCTGCC GGTGCCGGAT
GTTTCCGCCG TGGCGATCAG TTACGCGGAT GCGGAAGGGG CCGAGCAGAC GGTTGCGGCG
GAGCATGTCG ACCGGCTTCC GGTCGCGACC GGCACGCTGG TTCACCTGTC CGATGATTTC
GGCCTACCGA CGCTGGAGAG CGGCAACCCG GCGCCGATCA CCGTGCAATT CACCTGCGGG
TTTGGTGCGG CGGCCGATGT GCCGGCGAAC CTGAAACTGG CAGTCAAGGC GCTGGCAGCC
ACATGGTACG AGACCCGCAC CACGGAGCCG AGCGAGGCGC TGCCGATGGG TGTCGAGGCG
CTAATCCGGC CCTATCGCTG GGTGGCGATC TGA
 
Protein sequence
MKFRPILTAP PAESPVTLDE VKAQATVDFA DDDALLTGLR DAAVAYLDGF RGVLGRAMVT 
QTWQVQRASW AREMCLPVPD VSAVAISYAD AEGAEQTVAA EHVDRLPVAT GTLVHLSDDF
GLPTLESGNP APITVQFTCG FGAAADVPAN LKLAVKALAA TWYETRTTEP SEALPMGVEA
LIRPYRWVAI