Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1645 |
Symbol | |
ID | 4075748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1750371 |
End bp | 1751012 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638006958 |
Product | resolvase-like protein |
Protein accession | YP_613640 |
Protein GI | 99081486 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.27327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGTCCG AATCCGAGAA CCAGCCGACA CGCAAGATCG GATACGCTCG CGTCTCCACT GCCGACCAAA ACCCGGATAT GCAGATCCAT GAGCTGAAGC GGTACGGCGT CCCAGAGGAA TTGATCTTTG TGGACCGGGC CAGCGGCGGC ACCATGAAGC GACCCCAGTT CATGAGGGCG CTGAGGTATG CCCAATATGA AGGGACGGAG CTGGTCGTCT GGAAGCTGGA CCGCCTTGGG CGGACCCTTG GCGGCGTGCT GGATACGCTC AAGCTGCTGT CAGACCGCGG CGTTACCTTC GTCAGCCTGA CGGAGCGGAT CGACACCACG GGCCCTATGG GCAAGGCTAT GATCCACCTT CTGGCCGTCT TCGCCGAACT GGAGCGAGAC CTGATCGTGG AGCGCACCAA GGCCGGGATC GAGCGGGCGA AAGAGCGCGG CGACGTGGGT GGCCGACCAA AGGCTATGAC GCCGGAGCGG GTTGCCAAGG CAGAGGAAAT GCTTGCCGCT GGTGAGCGCG GCAACACGGT CTGGAAGGCG ATGAAGGAAC TCGATGGGCC GACGATCAGC CGGGCGGCAT ACTACGCCTG GCAGAAGGAA TGGGACGCGG GCCACCGCGC CCCGGATATC GTTGGAGAGT GA
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Protein sequence | MASESENQPT RKIGYARVST ADQNPDMQIH ELKRYGVPEE LIFVDRASGG TMKRPQFMRA LRYAQYEGTE LVVWKLDRLG RTLGGVLDTL KLLSDRGVTF VSLTERIDTT GPMGKAMIHL LAVFAELERD LIVERTKAGI ERAKERGDVG GRPKAMTPER VAKAEEMLAA GERGNTVWKA MKELDGPTIS RAAYYAWQKE WDAGHRAPDI VGE
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