| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1619 |
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| Symbol | |
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| ID | 4077721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1727252 |
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| End bp | 1727833 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006932 |
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| Product | phiE125 gp8 hypothetical protein |
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| Protein accession | YP_613614 |
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| Protein GI | 99081460 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01560] uncharacterized phage protein (possible DNA packaging)
[TIGR02215] phage conserved hypothetical protein, phiE125 gp8 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.834629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTCTGA CCCTTACCAC GCCAGCGGCT GATCTTCCTG TGTCGCTCGA GGAGGCAAAA
AGGCACTGCC GTGTCGAGGC GGATGACACC GAAGATGATC AGCTGCTCGA GGGTCTCATT
GCGGCGGCAG TGGACTACCT AGATGGCCCG TCCGGTATCC TTGGGCGGGC CATTATCACA
CAGACTTGGC TTTTGGAGCT GCCAAGCTTT CCCGTCAAAC TTGATCTTCC GCTAGAGCCG
GTTCGTTCGG TAACCATCAC CTATCTGGAC GCGTCCGGGG CGGAGCAGAC CTTGCCGGAA
GGAGCCTATG AGCTGAATGC GCGACCCTCG CAGCGGACGC AGTTGGCATT GGTTAGCGGC
ACGCAGATGC CAGTGCTAAA AGATACAAGC TGGCCTGTCA GGATTTCGAT CATCGCCGGG
TTCGGTGGTG CCAACGCCTG TCCGCCGGGG TTGAAAGTCG CCATCAAGAT GATCGTCGGT
CTTTGGTATG AGCATCGTGA GGCCATCATG CCGGTAGATG TGAATAGTGG CTGGCCGGCA
CCAGTTGGTG CTCTTTTGGC GCGCTGGCGC ATTCCTTTGT GA
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| Protein sequence | MRLTLTTPAA DLPVSLEEAK RHCRVEADDT EDDQLLEGLI AAAVDYLDGP SGILGRAIIT
QTWLLELPSF PVKLDLPLEP VRSVTITYLD ASGAEQTLPE GAYELNARPS QRTQLALVSG
TQMPVLKDTS WPVRISIIAG FGGANACPPG LKVAIKMIVG LWYEHREAIM PVDVNSGWPA
PVGALLARWR IPL
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