| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1583 |
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| Symbol | |
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| ID | 4078392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1692230 |
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| End bp | 1692826 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006896 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_613578 |
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| Protein GI | 99081424 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCCA AGGCAGAGCA GCGCAGGGCG GAGCTGCGCG AAAAACTGGT GGGCGCTGCA
GAGGCGCGCA TTCGCGAGGC TGGCGTGACA TCGCTGCGGG CGCGTGATCT GGCCAAGGAT
GCGGGCTGCG CGGTTGGGGC GATCTACAAC GCCTTTGACG ATCTGACGGC CTTGGTGATG
GCGGTCAACG GGCGCACGTT TCAGCGTCTC GGGGCCGAGG TTGAAGCCGC GGTCAAAGCC
TCCGAAGGGG CCTCGCCCAG CGACAGGCTG ATCCGAATGA GCGAAGCCTA TCTGGATTTT
GCAAGTGCAA ACAATCTCTT GTGGCGCGCT CTGTTTGACC TGGAACTCCC CGCCGATGGG
GAGGTGCCTG ATTGGTATCG CGCCGCATTG GATCGGCTGT TTCAGCACAT TGCCGGTCCT
GTGGCCGAAC TTTTCCCAGA TCAGCCGCAG CAGGAACAGG CGCTCACGGT GCGGGCGCTG
TTTTCCTCGG TGCATGGGAT TGTCTTGCTG GGGCTCGAAA ATCGTATTTC GGGCGTCCCG
CCGCAAGAAA TCCGGCGCAT GATTGCGCTG GTGTTGTCGC GCCTGACGAT GAAGTAA
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| Protein sequence | MTSKAEQRRA ELREKLVGAA EARIREAGVT SLRARDLAKD AGCAVGAIYN AFDDLTALVM
AVNGRTFQRL GAEVEAAVKA SEGASPSDRL IRMSEAYLDF ASANNLLWRA LFDLELPADG
EVPDWYRAAL DRLFQHIAGP VAELFPDQPQ QEQALTVRAL FSSVHGIVLL GLENRISGVP
PQEIRRMIAL VLSRLTMK
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