Gene TM1040_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1578 
SymbolppnK 
ID4078387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1688007 
End bp1688762 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content62% 
IMG OID638006891 
Productinorganic polyphosphate/ATP-NAD kinase 
Protein accessionYP_613573 
Protein GI99081419 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0061] Predicted sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCG CATTTCTGGC CAGCGAGGCC CCTTTGGCGC AGACGGCTCT TTCTGTTCTG 
AGCAAACGCT ACGGATCTGT CGCCGTCGAG GCCGCAGATG TTATCGTGGC GCTGGGGGGC
GATGGGTTCA TGTTGCACAC GCTGCGTGAC ACCGTTGATC TCAATATTCC GATCTACGGG
ATGAACCGCG GCACGGTTGG TTTCTTGATG AACAGCTTTG GCGAGGACGC GCTTCTGGAA
CGGCTGGAGG CCGCCAATGA AGAGATCATC CACCCCTTGC GGATGCGGGC GCAGGACCGG
GCCGGGGTCA TGCATGAGGC GATGGCGATC AACGAAGTGT CCTTGCTGCG GCAGGGTCCG
CAGGCGGCCA AGCTCAAGAT CTCGGTTGAT GGGCGGCAGC GGATGGCGGA GCTGGTTTGC
GATGGCGCGC TGGTGTCGAC GCCTGCGGGC TCCACCGCCT ATAATTTTTC GGCGCACGGC
CCGATCCTGC CCATCGGGGC GGATGTGCTG GCGCTGACGG CGATTGCGGC CTTTCGCCCA
AGGCGCTGGC GCGGCGCGTT GCTGCCCAGT GGGGCCACCG TGCGTTTTGA CGTGATCGAT
GCGGCCAAGC GACCCGTGAT GGCGGAAGCG GATTCGATTT CCTTCAAGGA GATCGACTGG
GTTGAAATCC AGAGTGAACG CCGGATCAGC CACAAGATCC TGTTTGACCC CGGTCATGGG
CTTGAGGAAC GGCTGATCTC GGAACAGTTC AACTGA
 
Protein sequence
MRIAFLASEA PLAQTALSVL SKRYGSVAVE AADVIVALGG DGFMLHTLRD TVDLNIPIYG 
MNRGTVGFLM NSFGEDALLE RLEAANEEII HPLRMRAQDR AGVMHEAMAI NEVSLLRQGP
QAAKLKISVD GRQRMAELVC DGALVSTPAG STAYNFSAHG PILPIGADVL ALTAIAAFRP
RRWRGALLPS GATVRFDVID AAKRPVMAEA DSISFKEIDW VEIQSERRIS HKILFDPGHG
LEERLISEQF N