| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1577 |
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| Symbol | |
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| ID | 4078386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1686460 |
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| End bp | 1687896 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638006890 |
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| Product | amidase |
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| Protein accession | YP_613572 |
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| Protein GI | 99081418 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAATC AAGAGCTTTG GCGCCTGAGC GCAGAAGAAT TGTCCACCCA GACCCGCAAC
GGCGACATCA GTCCAACAGA GGCGGTGACC TCTGTGCTTG CGCGGATGGA TCAGGTGAAC
CCGGCGCTCA ATGCGGTGGT CGAGGATCTC CGGGACGAGG CTCTGGCGCG GGCCGAAGTT
CTCGACAGCA CGCCAAAGGC GCTGCGCGGC CCCTTGCACG GCGTCCCTGT CACCATCAAG
ATCAACATCG ATCAAACCGG GCATCCGACA TCAAACGGCA TTCCTGCGCT CAAGGATCTG
ATCGCCCCCG ATGACGCGCC GGTGGTGCAA AACCTAGAAC GCGCCGGAGC TGTGGTGATC
GGGCGCAGCA ACACGCCAGA GTTTTCCTTC CGCGCCGATA CCGACAATCC CCTTTATGGG
CGCACCCATA ATCCCTGGGG GCAGCATATC TCGCCCGGCG GCTCTTCGGG CGGTGGCGGC
GCTGCAGTGA TGGCGGGGAT TGGTCCGCTG GCACATGGCA ATGACATTGG CGGCTCCCTG
CGCTTTCCCG CAGCGGCCAA TGGCGCGGTC ACCGTGAAGC CGGGCTTTGG GCGCGTGCCC
GCCTGGAACC CCAGCCAAAA AGCCGAACGC GGCCTATTGG CCCAATTGAT GAGCGTTCAA
GGCCTGATGA CCCGCTCCGC GCGCGATTTG CACCTCTCGA TGCCCGCGAT GATCGCGCCC
GACATTCGCG ACCCCTTCCA CGCCCCGGTG CCGTGGCGCG GGGCGGCGCC GGACGGCCCG
GTCAAGGTCG CCTTCACCCG CAACACCCAT GGCTATGACC TCCACCCCGA GGTGGACGCG
GCGCTCTTGG CGGCGCGCGA CGCGCTGATG GATGCCGGGT ATATCGTCGA GGAGATCGAG
CCCCCCAATG TCTTTGAGGC CGGGCGCACA GGCTATCGCG CGCTCATGGG CGAAATTCAT
GCGTTGATGA AACCCGACCT CGACGCCATG GGCTCCGAGA TCATCCGCAC GATGTTTGAC
ACCTATTTTC AGGAGTTCCC GCCCTTCCAC GGTGATGAGC TGCTCAAGAT GTACGCCAAA
CGCAGCCATT ACGCCCGCCA ATGGGCCATG TTCATGGCCG ATTACCCGCT GGTGCTGACG
CCCTTCCTGC CGCATCCGTT CTTTGCGCCT GATCGCGATC GCGAAGGTGT CGCGGGCGCC
CATGATGTGC TGGGCTGTGC GGTCTACTCC TACGCCATGA ATTACATGGG CCTACCAGCC
GCCTGCGTGC CTGCGCGCCT CGCACAGCTT CCAAAGGGCC TACAACCCAT CAACGTGCAG
ATCGTGGCGC CGCGCTGGCG CGAAGACATG GCCGTGGATG CCGCTATCGC CATTGAGGAT
CGCATCGGAC AGATGGCTGC CCCGCTCTGG GATCACATGC AGTCCATGAC TCGCTGA
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| Protein sequence | MSNQELWRLS AEELSTQTRN GDISPTEAVT SVLARMDQVN PALNAVVEDL RDEALARAEV
LDSTPKALRG PLHGVPVTIK INIDQTGHPT SNGIPALKDL IAPDDAPVVQ NLERAGAVVI
GRSNTPEFSF RADTDNPLYG RTHNPWGQHI SPGGSSGGGG AAVMAGIGPL AHGNDIGGSL
RFPAAANGAV TVKPGFGRVP AWNPSQKAER GLLAQLMSVQ GLMTRSARDL HLSMPAMIAP
DIRDPFHAPV PWRGAAPDGP VKVAFTRNTH GYDLHPEVDA ALLAARDALM DAGYIVEEIE
PPNVFEAGRT GYRALMGEIH ALMKPDLDAM GSEIIRTMFD TYFQEFPPFH GDELLKMYAK
RSHYARQWAM FMADYPLVLT PFLPHPFFAP DRDREGVAGA HDVLGCAVYS YAMNYMGLPA
ACVPARLAQL PKGLQPINVQ IVAPRWREDM AVDAAIAIED RIGQMAAPLW DHMQSMTR
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