| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1549 |
|---|
| Symbol | |
|---|
| ID | 4075847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 1656405 |
|---|
| End bp | 1656743 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638006862 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_613544 |
|---|
| Protein GI | 99081390 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3502] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0531492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.447397 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATAT ACAAGATTTT CCGTGACGAT GAATGGCGCG CCTTTGAGGC CGCCGGTGAA
ACCGATGGCG CGCCCGTGGA TCTCGCGGAT GGCTACATCC ATTTCTCGAC AGCCGCGCAG
GCGACCGAGA CCGCAGCCAA GCATTTCGCC GGTGCCGAGG GGCTTTGGCT TCTGGCGTTT
GAAGCAGACC AGATGGGCGA TGCGCTCAAA TGGGAGCCCT CGCGCGGGGG CGCTTTGTTT
CCCCATCTCT ATCGCCGCCT GACCCTTTCG GAGATGCTCT GGGCAAAGCC ACTGCCGCTG
GTCGAAGGCA CCCATCGCTT CCCTCAAGAG ATGGTCTGA
|
|---|
| Protein sequence | MLIYKIFRDD EWRAFEAAGE TDGAPVDLAD GYIHFSTAAQ ATETAAKHFA GAEGLWLLAF
EADQMGDALK WEPSRGGALF PHLYRRLTLS EMLWAKPLPL VEGTHRFPQE MV
|
|---|
| |