| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1524 |
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| Symbol | |
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| ID | 4075822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1628057 |
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| End bp | 1628422 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006837 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_613519 |
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| Protein GI | 99081365 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.348757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.447397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGATAA AACGCATTTC TTCGGGCGGA GAATTTGAGG CCAAGGTCGG CTATTGCCGA
GCGGTTGTGG CGGGCGGCTT TGTGCATGTC GCCGGCACCG TGGGGCAGGG CGAAGATGTG
GTGGCACAGT GCCGCTCGGC TCTGGCGACC ATCGAGGCTG CGCTTGCCAA GGCCGGTGTG
AGTTTTGCCG AGGTGGTACG CGTGAATTAT TACCTTCCCG ATGCGTCCGA GTTTGAACCC
TGCTGGCCGA TCCTTGCTGA AACCTTTGGA GAAAACCCGC CTGCCGCGAC CATGATTGAA
TGCAACCTGA TCGCGCCGGA ATACCGGATC GAGATCGAAG TGACAGCACT GGCGACCCCG
GCATAG
|
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| Protein sequence | MTIKRISSGG EFEAKVGYCR AVVAGGFVHV AGTVGQGEDV VAQCRSALAT IEAALAKAGV
SFAEVVRVNY YLPDASEFEP CWPILAETFG ENPPAATMIE CNLIAPEYRI EIEVTALATP
A
|
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